Gene Information

Name : Alide_4024 (Alide_4024)
Accession : YP_004128617.1
Strain : Alicycliphilus denitrificans BC
Genome accession: NC_014910
Putative virulence/resistance : Unknown
Product : secreted protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4194840 - 4195754 bp
Length : 915 bp
Strand : +
Note : KEGG: dia:Dtpsy_1167 secreted protein

DNA sequence :
ATGAAGCACCCTGTACTCATGCTGCTGGGGCTGCTGGCCGTGGCTGCGTTCCCCGCCGCTCAGGCGGTGGAGATCCTGCG
CTGGGAACGCATGCCGTTGGCGGTGCCGCTGAAGGTCGGCCAGGAGCGGATCGTGTTCATCGACCGCAACGTCCGCGTCG
GAGTGCCTGCGGGCGTGGGCGAACGCCTGCGCGTACAGAGCGCAGGCGGCGCGGTGTACCTGCGCGCCAGCGAGCCAATC
GAGCCCACGCGGCTGCAATTGCAGGACGCCGACACCGGCGCGCTGATCCTGCTGGACATTGCGGCCGAGGCGCCCAAGGA
CGGCGAAGCCGAACTGGAGCCGGTGCGCATCGTCGAGGACAGCAGCACTCCGGCTCGCTATGGCGATCAGTCCAACGGTG
CCGAGGCCCCGGCGCGCGCCCAGGACCAGTCGGGTGCGCGGCCGGCGCGGCGCGAAACCCCCATCCCCGTGGTGCTGACC
CGCTTCGCCGCGCAGAGCCTTTACGCGCCGCTGCGCACCGTGGAGCCACTGCCGGGCGTCATGCGCATCAACCTGCGCCG
CGACATGGACCTCGGCACGCTGATGCCGACATTGCCCGTGCGCGCACTCGCGCTCGCGTCGTGGCGTCTGGAAGACCAAT
GGGTGACGGCCGTGCGCCTGACCAATACCAGCGCCGGCTGGGTCACGCTTGATCCGCGTGTGCTGCAGGGCGATTTCCTG
ACGGCGACCTTCCAGCATGAGGCGCTCGGGCCGCACGGCGTGCCCGAGGACACGACCGTCCTGTACCTGGTGACGCGCGG
GCACGGCTTGGCGCAGTCGCTGCTGCCGGCCATTCACCGCTTCGACCCAGCCGTGCATCTGCCGCAGCCAGAAGCCGAAG
CCACCGAACGCAAGGAGGCCGATCATGCGCAGTAA

Protein sequence :
MKHPVLMLLGLLAVAAFPAAQAVEILRWERMPLAVPLKVGQERIVFIDRNVRVGVPAGVGERLRVQSAGGAVYLRASEPI
EPTRLQLQDADTGALILLDIAAEAPKDGEAELEPVRIVEDSSTPARYGDQSNGAEAPARAQDQSGARPARRETPIPVVLT
RFAAQSLYAPLRTVEPLPGVMRINLRRDMDLGTLMPTLPVRALALASWRLEDQWVTAVRLTNTSAGWVTLDPRVLQGDFL
TATFQHEALGPHGVPEDTTVLYLVTRGHGLAQSLLPAIHRFDPAVHLPQPEAEATERKEADHAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C50 AAN62144.1 hypothetical protein Not tested PAGI-2(C) Protein 3e-116 88
ORF SG60 AAN62282.1 hypothetical protein Not tested PAGI-3(SG) Protein 1e-73 65
EXA36 ABD94645.1 conserved hypothetical protein Not tested ExoU island A Protein 4e-71 57
unnamed ABR13365.1 hypothetical protein Not tested PAGI-5 Protein 1e-70 57
pph81 CAI36122.1 hypothetical protein Not tested PPHGI-1 Protein 2e-75 57
RL025 AAP84152.1 conserved hypothetical protein Not tested PAPI-1 Protein 9e-71 56
api36 CAF28510.1 hypothetical protein Not tested YAPI Protein 5e-53 50
YpsIP31758_3708 YP_001402662.1 hypothetical protein Not tested YAPI Protein 5e-53 50
YE3485 YP_001007644.1 hypothetical protein Not tested YAPI Protein 9e-54 50
PMI2580 YP_002152299.1 hypothetical protein Not tested Not named Protein 2e-52 50
STY4569 NP_458654.1 hypothetical protein Not tested SPI-7 Protein 1e-51 50
t4266 NP_807864.1 hypothetical protein Not tested SPI-7 Protein 1e-51 50
Pmu_03100 YP_005176209.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 1e-49 44