Gene Information

Name : Alide_4001 (Alide_4001)
Accession : YP_004128594.1
Strain : Alicycliphilus denitrificans BC
Genome accession: NC_014910
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4176013 - 4176807 bp
Length : 795 bp
Strand : +
Note : KEGG: bpt:Bpet1034 transposon; TIGRFAM: Domain of unknown function DUF1845; PFAM: Domain of unknown function DUF1845

DNA sequence :
ATGGCAACCAGCAACGAACCATTGCAACTCAACCTCGGCTCCCTGCGCAGCGCGATGTCGCTGACGCTGCACACGCATCA
CGCTTCCCGCATCTGGCACGGCCGCGCCGCCGCCGAAGGGCGACCCGGCATCGTCGGCCTGAACGGCTACATCGCGGTGA
TGAATAAGATGAAGCGCGGCTCGGAGCAGGACGACCCCTACAGCGACTGGTGGATGCTGCGCATCGAGGACAAGCTCGAC
CAGACCAGGACCACGCTGCAGACCTTGCGCAAACAAGTGGACCAGGCACTGGCGGGCGTGCCTGCGGCATTGAGCCTGGG
CGAGAACCTCAACGTGCAGCCCGTCAAGCTGCCGCTGTTCGTCAATGCGCAGTTGGGCTTTGCCGCCGTCTATCTCCTGG
CCGACTACGACGACATCGCGCGCAAGCTGATCCTCGCCCACCACACCGCGCTGATCGACCGCAGCACTTTGGAGCGCTGG
CTCAACGAGGGCGCGCACGCGCTGCGCAGCCTGTTCTCGCTGGCCCAGCAGTACCGCTACTCGGGCTGCACCCGCGACGA
TTTCGCGGCGAAGAATGCCGCAGCGCGGGTCGCGCTGGAGAAGTTCGGCGAGTTGCCGCAGGACGTCCTCGAAGGCACGC
GCCGCTCGACGTTTGCGCCACCCATGGTGCGCCGTGGTCTGCAACAGCGCGGTGAGAATCCTGCCGCAGCCGCTACCAGC
GTCGATGGTGATGCGGCCGCTGCTGCCGACCCGTCCGAAGGCGCAGCCACTGCCGGCGAGGACGAATCCGCATGA

Protein sequence :
MATSNEPLQLNLGSLRSAMSLTLHTHHASRIWHGRAAAEGRPGIVGLNGYIAVMNKMKRGSEQDDPYSDWWMLRIEDKLD
QTRTTLQTLRKQVDQALAGVPAALSLGENLNVQPVKLPLFVNAQLGFAAVYLLADYDDIARKLILAHHTALIDRSTLERW
LNEGAHALRSLFSLAQQYRYSGCTRDDFAAKNAAARVALEKFGELPQDVLEGTRRSTFAPPMVRRGLQQRGENPAAAATS
VDGDAAAAADPSEGAATAGEDESA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C104 AAN62197.1 conserved hypothetical protein Not tested PAGI-2(C) Protein 5e-93 97
ORF SG99 AAN62320.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 3e-81 85
RL097 AAP84222.1 conserved hypothetical protein Not tested PAPI-1 Protein 4e-57 55
unnamed ABR13440.1 hypothetical protein Not tested PAGI-5 Protein 2e-56 54
pph10 CAI36051.1 hypothetical protein Not tested PPHGI-1 Protein 4e-55 52