Gene Information

Name : Alide_4000 (Alide_4000)
Accession : YP_004128593.1
Strain : Alicycliphilus denitrificans BC
Genome accession: NC_014910
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4174361 - 4175593 bp
Length : 1233 bp
Strand : +
Note : KEGG: bpt:Bpet1033 hypothetical protein

DNA sequence :
ATGGCCGTGGACGACACCGCCCCACGAGCCCCGCGTCAAGGCCCCATCGCACTCGCCGACCTGTTCGACGCTGCGCTGAA
GGACCTCACGCCCAATCCAAATCCCCGCGCGCCAGCGCCCATGGCAGTGCCCACGCCTGCGGCGTCCGGCGACGCCTTCC
TATTCAGTGGCAATCGGCACGAGAGCGTGCCGCGGCGGCTGTTCGTCGACCGCCGCCTGACACCGCTGGAGCGCAACGCC
TGGCAGGTGTTCCGGCTGATGCTCAACGACGACGGCGTCACGACGTTCCCGACCTATGAGCAGTTGCGCCCATGGCTGGC
GTCCATGCCCTGCGCGGGACAAGCCTCCCACGAGACCGTCGCGCGGGCGCTGACGCTGCTGCGCCTGACGCGCTGGCTGA
GCCTCGTGCGACGACGGCGCGACCCCAAGACCGGCCGCATCCTCGGAAACCTCTACGTCCTGCACGACGAACCCCTGACA
CTGTTCGAGGCCATGCAGCTCGACGCCGACTACCTGGCCCTGGTCAGCCAGTCGCTGGGGCATTCCGCCAAGGCCGTCCA
GGTGGTGGGACTCAACACCCTCCAGGAGATCGCGGACGACCCGATGTTGTCCGGACGCACCTTGCCGTCGCGGCTGCAAG
TGCTCGCCGAGCGCCTGGCCGACCAGGGCATCACCGCCACCGCAAGTTATCCACAGGAGGATGCGATCCACGATTCCGAA
GAAGGGCCCGCCAGCCTTCTTCGGAATGGCGAACGCCCTTCTTCGGAATCCGAAGCAGGGCCGAAACCCGCGCCAGACGG
CGCTCTTCGGAATCCGAAGCAGGACCGTACAGTACGTAGTAGTCGTATTGATGAAGTACGTACTACCGCGCAGGCGCGCG
CGCTGGGCGACCTGCAATGGCCCAAGCGTTTCGCGGAACTGAAGGCGGAACAGCAAGCCGGCGCCAGGATGGCGTTGCAG
CAAGTGGACGCTGCCCTGCGGCAGGCTGTGCTGGACGAGTGGGCCGCACGGTGCGGCAAGCATGGCATCCGCAACCCCGC
CGGGTACCTGTTCGGCATCATCCAGCGCGCCATGCGCGGCGAGTTCAATGCGTGGGCCAAGCAGACCAGCCCGGCAGCGC
CAACACCATCGGCGGCGCGAGCGCCACCGCCCGAGCCGCCGCGCAACGTCGTGCCGCCCGCGGTGGCCCGGCAGCACATC
GAGCGCCTGCGCGATCTGCTGCGCAAATCCTGA

Protein sequence :
MAVDDTAPRAPRQGPIALADLFDAALKDLTPNPNPRAPAPMAVPTPAASGDAFLFSGNRHESVPRRLFVDRRLTPLERNA
WQVFRLMLNDDGVTTFPTYEQLRPWLASMPCAGQASHETVARALTLLRLTRWLSLVRRRRDPKTGRILGNLYVLHDEPLT
LFEAMQLDADYLALVSQSLGHSAKAVQVVGLNTLQEIADDPMLSGRTLPSRLQVLAERLADQGITATASYPQEDAIHDSE
EGPASLLRNGERPSSESEAGPKPAPDGALRNPKQDRTVRSSRIDEVRTTAQARALGDLQWPKRFAELKAEQQAGARMALQ
QVDAALRQAVLDEWAARCGKHGIRNPAGYLFGIIQRAMRGEFNAWAKQTSPAAPTPSAARAPPPEPPRNVVPPAVARQHI
ERLRDLLRKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C105 AAN62198.1 conserved hypothetical protein Not tested PAGI-2(C) Protein 3e-140 91
ORF SG100 AAN62321.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 4e-95 70
pph09 CAI36050.1 hypothetical protein Not tested PPHGI-1 Protein 2e-44 46
RL100 AAP84225.1 conserved hypothetical protein Not tested PAPI-1 Protein 2e-43 43