Gene Information

Name : Alide_3770 (Alide_3770)
Accession : YP_004128369.1
Strain : Alicycliphilus denitrificans BC
Genome accession: NC_014910
Putative virulence/resistance : Unknown
Product : integrase catalytic region protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 3925534 - 3926346 bp
Length : 813 bp
Strand : -
Note : PFAM: Integrase catalytic region; KEGG: ajs:Ajs_3784 integrase catalytic subunit

DNA sequence :
ATGGTCGTTCAAACCCTCGTGGACGAGCACGGCATGAGCGAGCGACGTGCCTGCCAGGCCAGCGGCATCGCCCGCTCCAC
CCTGCGCTACCGAGCCGTTGCGCGCGACGACTCCGGGGTCATCGCCTTCATCCAGACGCACATGGCGCTCAACCCGCGTC
ACGGCTTTGGCCTGCTGTACGACAGTGCCCGTCACCAAGGCAAGCCCTGGGGCAAGACGGTGCTCTGGCGTGTGTACTGC
GAACTGCGGCTGAACCTGCCACGGCGCGGCAAGAAGCGGCTGCCCGCGCGCATCAAACAGCCACTACAGGCCGCTGGCCA
ACCCAACCAGGGCTGGAGCTGCGACTTCATGGCCGATGCGCTGTGGTCCGGCAGGCGGTTTAGGACCTTCAACGTCATCG
ACGAGTTCAACCGCGAAGGCTTGCGCATCGAGGTCGACACCAGCCTGCCGGCTGCTCGCGTCATCCGGGCCTTGAACGAA
CTGGTGGAAGTACGCGGTGCACCGCTGTCGATTCGCTTGGACAACGGCCCGGAGTTCATCGCCCATGCTTTAGCGCAATG
GGCGCAGAGCAAGGGCATTGCTCTCAATCACATCCAGCCCGGAAAGCCCACGCAGAACGCCTATGTCGAACGATTCAACA
AGACCTACCGTACCGAGGTGCTCGATTGCTACGTCTTCGACAGCCTGCAGGAGGTGCGTGACATGACGGCCGACTGGCTG
CACCGATACAACCACCATCGACCCCACGAAGCCCTCGGCCGAATCCCACCGGTCGAATACCGTGTCAAACTGTTCCCCAA
CCTCTACTTCTGA

Protein sequence :
MVVQTLVDEHGMSERRACQASGIARSTLRYRAVARDDSGVIAFIQTHMALNPRHGFGLLYDSARHQGKPWGKTVLWRVYC
ELRLNLPRRGKKRLPARIKQPLQAAGQPNQGWSCDFMADALWSGRRFRTFNVIDEFNREGLRIEVDTSLPAARVIRALNE
LVEVRGAPLSIRLDNGPEFIAHALAQWAQSKGIALNHIQPGKPTQNAYVERFNKTYRTEVLDCYVFDSLQEVRDMTADWL
HRYNHHRPHEALGRIPPVEYRVKLFPNLYF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trp1400B CAB46580.1 IS1400 transposase B Not tested HPI Protein 8e-64 50
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 8e-38 42