Gene Information

Name : Alide_3708 (Alide_3708)
Accession : YP_004128311.1
Strain : Alicycliphilus denitrificans BC
Genome accession: NC_014910
Putative virulence/resistance : Unknown
Product : udp-n-acetylmuramoylalanine/d-glutamate ligase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0771
EC number : -
Position : 3859880 - 3861661 bp
Length : 1782 bp
Strand : -
Note : KEGG: dia:Dtpsy_2982 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein

DNA sequence :
ATGAACGACGAGCGCCCCGATCCCCTGAACCCCGAGACGCCCGCTCCCGAAGCGGCGGCCCCGGCGGCTGCGCCCGCGTT
CGACTACCAGGCACCGGCCGTTTCCGCCGCGGACCAGGCCAAGGAGTTCGTCGCGCGCATCTTCTCGGACATGGGCGGCG
CCGAAGAGCCCGCCGCGCAGCCGCAGCAGCCCCCGCAGGAAGAGGCCGGCGCCGCGCCCGAAAGCGAAAGCCGGCTCCCG
GCCATCCACCCCGGCGAGGCTCTCGGCTACATGGCGGGCCGCCGCGTGCTGGTGCTGGGGCTGGGTACCTCGGGCCTGGC
GATGGCGCGCTGGTGCGCGCGCTGCGGCGCGCAGGTGACGGTGGCCGACACGCGCGAGAACCCGCCGCAGCTCGCCCAGC
TGCGCGCCGAGCTGCCGCAGCTCGAATTCATCGCCGGGCCCTTCGGCGCCGCGCTGGTCGAGGGCCACGCGCTGGATGCG
GTCTACCGCTCGCCGGGCCTGGCGCCGACCGATGTTGCTCCTGTCGTGATAGCTGCAAGCGCACGTCAGATAATCGTTGG
AGGCGAATTAAGCTTGTATTCCGAAGCGCTGCACGAGCTGCGCACGCGCCACGGCTACGCACCCGCCGTGCTCGCCATTA
CGGGTACCAACGGCAAGACCACGGTCACCTCGCTCACCGGCCTGCTCGTCGACTGCGCGGGCAAGAGCGTGGCCGTGGCC
GGCAACATTGGCCCCACGCTGCTGGACACGCTGGGCGAGCGCCTGGATGCGGGCCAACTGCCCGAGGTCTGGGTGCTGGA
GCTGTCGAGCTTCCAGCTCGACGGCGCGCAGGGCTTCGAGCCCACGGCTGCTACCGTGCTCAACGTCACGCAGGACCACT
TGGACTGGCACGGCAGCATGCAGGCCTATGCCCAGGCCAAGGCGCGCATCTTCGGGGCGGCGGGCCTGATGATCCTGAAC
CGCGACGACCCGCTCGTCATGGACATGCTGCCGCCGCCCGTGCGCGTGAAGCTGCAGAAACCCCAGCTGCGCGCCCACGT
GACCTTCGGCGGCGACATGCCGCAGCGCCCCGGCGACTTCGGCATCGAGGTGGTGAGCGGCATGGCCTGGCTCGTGCGCG
CGCATGATGCCGACGAGACAGCGCGCCGTGGCAAGGTGCAGGAGGCCGAGCTGCACGTGCAGCGCCTCATGCCCGCCGAC
GCGCTGCGCATCCGCGGCCGCCACAACGCGCTGAACGCGCTGGCCGCGCTGGCGCTCGCACAGGCGGCGGGCTGCGCGCT
CGCGCCCATGCTCTACGGCCTGCGCGAATACCGCGGCGAGCCGCACCGCGTGGAGCCCGTGGGCATGGTGCGCGAGGTGG
AGTACTTCGACGACAGCAAGGGCACCAACGTGGGCGCCACCGTGGCCGCGCTCACCGGCCTGGGCGCGGACCGGCGCCTG
GTGCTCATCCTGGGCGGCGACGGCAAGGGCCAGGACTTCTCGCCGCTGGCCGCGCCCGTGGCGCGCTACGCCCGCGCAGC
GGTGCTGATCGGCCGCGACGCGCCGCAGATCCGCGCCGCGCTCGAAGGCTGCGGCGTGCCGCTGCTCGATGCCGCGACGC
TGCCCGAGGCCGTGCAGTTGGCCAGCCAGCGCGCCCATGCGGGCGACGCGGTGCTGATGTCGCCGGCCTGTGCCAGCCTG
GACATGTTCGACAACTATGGCCACCGCGCCCGGGTGTTCGTCGCGGCCGTGCAGGCGTTGGCCGAGGACGCGGGCCAGCC
GCTCGAAGGGGGGCACGCATGA

Protein sequence :
MNDERPDPLNPETPAPEAAAPAAAPAFDYQAPAVSAADQAKEFVARIFSDMGGAEEPAAQPQQPPQEEAGAAPESESRLP
AIHPGEALGYMAGRRVLVLGLGTSGLAMARWCARCGAQVTVADTRENPPQLAQLRAELPQLEFIAGPFGAALVEGHALDA
VYRSPGLAPTDVAPVVIAASARQIIVGGELSLYSEALHELRTRHGYAPAVLAITGTNGKTTVTSLTGLLVDCAGKSVAVA
GNIGPTLLDTLGERLDAGQLPEVWVLELSSFQLDGAQGFEPTAATVLNVTQDHLDWHGSMQAYAQAKARIFGAAGLMILN
RDDPLVMDMLPPPVRVKLQKPQLRAHVTFGGDMPQRPGDFGIEVVSGMAWLVRAHDADETARRGKVQEAELHVQRLMPAD
ALRIRGRHNALNALAALALAQAAGCALAPMLYGLREYRGEPHRVEPVGMVREVEYFDDSKGTNVGATVAALTGLGADRRL
VLILGGDGKGQDFSPLAAPVARYARAAVLIGRDAPQIRAALEGCGVPLLDAATLPEAVQLASQRAHAGDAVLMSPACASL
DMFDNYGHRARVFVAAVQALAEDAGQPLEGGHA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00311 YP_008207776.1 UDP-N-acetylmuramoylalanine-D-glutamate ligase Not tested AbaR25 Protein 1e-46 41
BJAB0868_00315 YP_008211641.1 UDP-N-acetylmuramoylalanine-D-glutamate ligase Not tested AbaR26 Protein 1e-46 41