Gene Information

Name : Alide_0368 (Alide_0368)
Accession : YP_004125033.1
Strain : Alicycliphilus denitrificans BC
Genome accession: NC_014910
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase sdr
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 395170 - 395943 bp
Length : 774 bp
Strand : +
Note : PFAM: short-chain dehydrogenase/reductase SDR; KEGG: dia:Dtpsy_0225 short-chain dehydrogenase/reductase SDR

DNA sequence :
ATGACCGCGGCGATGGACCGGTTCAGCCTGCGCGGCAGGCTGGCGCTGGTGACCGGCGCCTCCAGCGGCCTGGGAACGCA
CTTCGCCCAGGTGCTGGCCGCCGCCGGCGCCCGCGTGGCCGTGGCCGCGCGCCGCGTCGACAAGCTGCAGGGCGTGGTGG
ACGCCATCGCGGCCGAGGGCGGCGAGGCGCGCGCCTTCGCGCTCGACGTGGCCGACAGCGCCAGCGTGCGCGCCTGCTTC
GACGCGCTGTGCGCCTGGGGTGTGCCCGACGTGGTGGTCAACAACGCGGGCGTGACCGTGACGCGCCCCGCGCTGGAGCA
GACGGAAGAAGACTTCGACCATGTGCTCGGCACCAACCTCAAGGGCAACTGGCTCGTGGCCACCGAGGCCGCGCGCCGCA
TGGTGGCGGCGGGCAAGGGCGGCGCGATCGTCAACGTGGCATCGATCCTGGGCGAGCGCGTGGCGGGCGGCGTGGCGCCA
TATGCCATCTCCAAGGCCGGCGTGGTCCAGGCCACCAAGGCCCTGGCGCTGGAGCTGGCGCGCCACGGCATCCGCGTGAA
CGCGCTGCTGCCCGGCTACGTGGTGACCGACCTGAACCGCGGCTTCCTCACCAGCCCGGCGGGCGAGAAGCTGCGCGCGC
GTATCCCCAGCCGCCGCTTCGGCGAGGTGACCGACCTGGACGGCCCGCTGTTGCTGCTGGCCTCCGACGCGGGCGCCGCC
ATGTCCGGCGCCACGCTGGCCGTCGATGGCGCACACCTGGTGAGTTCGCTATGA

Protein sequence :
MTAAMDRFSLRGRLALVTGASSGLGTHFAQVLAAAGARVAVAARRVDKLQGVVDAIAAEGGEARAFALDVADSASVRACF
DALCAWGVPDVVVNNAGVTVTRPALEQTEEDFDHVLGTNLKGNWLVATEAARRMVAAGKGGAIVNVASILGERVAGGVAP
YAISKAGVVQATKALALELARHGIRVNALLPGYVVTDLNRGFLTSPAGEKLRARIPSRRFGEVTDLDGPLLLLASDAGAA
MSGATLAVDGAHLVSSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01499.1 2-deoxy-D-gluconate 3-dehydrogenase Not tested PAGI-1 Protein 2e-54 62