Gene Information

Name : Alide_3618 (Alide_3618)
Accession : YP_004128221.1
Strain : Alicycliphilus denitrificans BC
Genome accession: NC_014910
Putative virulence/resistance : Virulence
Product : response regulator receiver
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3761388 - 3762056 bp
Length : 669 bp
Strand : -
Note : KEGG: vap:Vapar_2384 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver

DNA sequence : 
ATGCTGCACCCCATGCGCCTGCTGCTTGTAGAGGACGACACCATGATCGGCGAGGCCGTGCGCGACCTGCTGCGCGCCGA
GCATTACGCCGTCGACTGGGCCACCGACGGCGACATGGCCGACGCCGCGCTCGCCACCCAGCAGTACGACCTTGTGCTGC
TGGACCTGGGCCTGCCGCGCCGCGATGGCCTGGCCGTGCTGCGGTCGCTGCGCGCGCGCAAGGACCGCACGCCCGTCCTG
ATCGCCACCGCGCGCGACGGCGTGGCCCAGCGCGTCGAGGGGCTGGACGCCGGCGCCGACGACTACGTGCTCAAGCCCTA
TGACGCGGGCGAGCTGCTGGCGCGCATACGCGCGCTGCTGCGCCGCGCGAGCGGGCGGGCCGAGCCGGTGTACGAGCACC
AGGGCGTCACGCTCAACCCCGGCACGCGCGAGGCCACGGTGCAGGGCCGGCCGGTGGTGCTGTCGGCGCGCGAATGGGCG
GTGCTCGAACCCCTGATCGCGCGCCCGGGCATGGTGCTGTCGCGCCAGCAGATCGAAGACAAGCTCTACGGCTGGGGCGA
CGAGGTCAGCAGCAACGCCGTCGAGGTCTACGTGCACGGCCTGCGCAAGAAGCTCGGGGCTCATATCGTGCTCAACGTGC
GCGGCCTCGGCTACATGGTGCCCAAATGA

Protein sequence : 
MLHPMRLLLVEDDTMIGEAVRDLLRAEHYAVDWATDGDMADAALATQQYDLVLLDLGLPRRDGLAVLRSLRARKDRTPVL
IATARDGVAQRVEGLDAGADDYVLKPYDAGELLARIRALLRRASGRAEPVYEHQGVTLNPGTREATVQGRPVVLSAREWA
VLEPLIARPGMVLSRQQIEDKLYGWGDEVSSNAVEVYVHGLRKKLGAHIVLNVRGLGYMVPK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 5e-21 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Alide_3618 YP_004128221.1 response regulator receiver BAC0487 Protein 5e-25 43
Alide_3618 YP_004128221.1 response regulator receiver BAC0197 Protein 4e-18 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Alide_3618 YP_004128221.1 response regulator receiver VFG0473 Protein 4e-22 42