Gene Information

Name : Alide_3409 (Alide_3409)
Accession : YP_004128016.1
Strain : Alicycliphilus denitrificans BC
Genome accession: NC_014910
Putative virulence/resistance : Unknown
Product : alanine racemase
Function : -
COG functional category : R : General function prediction only
COG ID : COG0325
EC number : -
Position : 3564357 - 3565151 bp
Length : 795 bp
Strand : +
Note : PFAM: alanine racemase domain protein; KEGG: dac:Daci_3709 alanine racemase domain-containing protein

DNA sequence :
ATGACAGCCACCCGCCACGACCAGCATGGCCGCTACCCGCAGGCCGCGACGCTGCAGGACTTCCAGCGCCACCTCGCCAC
CGTGCAGGCACGCATCGCCGCCGCCTGCCAGCGCGCCGGGCGCGACCCGGCCAGCGTGCGCCTGCTGCCCGTGAGCAAGA
CCCAGCCCGAGGCCCGCGTGCGCCTGGCCCACGCGGCGGGCTGCCGCCTGCTGGGCGAGAACAAGCCGCAGGAGGCCTAC
GGCAAATGGCTCGCCACGCAGGACCTGCCCGGTCTGCGCTGGTCGGTCATCGGCCACCTACAGACCAACAAGGCAAAGCT
GGTGGCGCGCTTCGCCAGCGAGTTCCAGGCGTTGGACAGCCTGCGCGTGGCCGAGGCACTGGAGCGGCGCCTGCAGGCCG
AGGGCCGCGCGCTGGATGTGTTCGTGCAAGTCAACACCTCGGGCGAAGCCAGCAAGTACGGCCTGCTGCCCAGGGAAGTG
GCGGCCTTCCTGCGCGCCCTGCCCGCCTTCCCGGCGCTGCGCGTGCGCGGGCTGATGACGCTGGCGCTGTTCTCCAGCGA
CGCCGCGCGCGTGCGCCGCTGCTTCGTGCTGCTGCGCACGCTGCGCGACCGGCTGCGCCAGGAGGCGCCTGCGGGCATCA
CGCTGGAGGAGCTGTCGATGGGCATGTCGGGCGACTTCGAGATCGCCATCGAGGAAGGCGCTACCGTCGTGCGCGTGGGC
CAGGCGCTCTTCGGCGCGCGGGCGCTGCCCGACGGCCACTACTGGCCCAGTTCCTGCGAGGAAACCCCACCATGA

Protein sequence :
MTATRHDQHGRYPQAATLQDFQRHLATVQARIAAACQRAGRDPASVRLLPVSKTQPEARVRLAHAAGCRLLGENKPQEAY
GKWLATQDLPGLRWSVIGHLQTNKAKLVARFASEFQALDSLRVAEALERRLQAEGRALDVFVQVNTSGEASKYGLLPREV
AAFLRALPAFPALRVRGLMTLALFSSDAARVRRCFVLLRTLRDRLRQEAPAGITLEELSMGMSGDFEIAIEEGATVVRVG
QALFGARALPDGHYWPSSCEETPP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1555 YP_005681817.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 8e-40 57
CpC231_1557 YP_005683917.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 8e-40 57
cpfrc_01564 YP_003783964.1 hypothetical protein Not tested PiCp 6 Protein 8e-40 57
CpI19_1562 YP_005686005.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 8e-40 57