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Name : Alide_3360 (Alide_3360) Accession : YP_004127967.1 Strain : Alicycliphilus denitrificans BC Genome accession: NC_014910 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 3511216 - 3512532 bp Length : 1317 bp Strand : - Note : TIGRFAM: seryl-tRNA synthetase; KEGG: dia:Dtpsy_2772 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like DNA sequence : ATGCTCGACATCCTCCTCCTTCGCAAAGACCTCGCATCGGCCGTCGCCCGGCTGGAAACCCGCAAGAAGCCCCAGGCCTT CCTGAACGTGGAGGCGTTCCAGGCCCTCGAATCCGAGCGCAAGACCATCCAGACGCGCACCGAGGAGCTGCAGTCCCGGC GCAACCAGCTGTCCAAGCAGATCGGCCAGCTCATGGGCAAGGGCGAGAAGGACGCGGCCGAGGCCGCCAAGGCCCAGGTG GCCGCGATCAAGGAGGAGCTCGACGGCTCCGCCGCGCGCCTGGAGCAGATCCAGTCCGAGCTGCAGGCCATGCTCGCCGC CGTGCCCAACCTGCCGCACGAGAGCGTGCCCGTGGGCAGCGACGAGGCAGGCAACGTCGAGGTGCGCCGCTGGGGCACGC CCCGCGACTTCGGCTTCGCCGTGAAGGACCACGTGGACCTGGGCGCGCCGCTGGGTCTCGATTTCGACATGGGCGCGAAG CTCTCGGGCTCGCGCTTCACCGTGATGAAGGGCCCCATCGCCCGCCTGCACCGCGCGCTTGCGCAATTCATGCTCGACGT GCAGACCGGCGAGCACGGCTACACCGAGTGCTACGTGCCCTACATCGTCAATGCCGACTCGCTGCGGGGCACGGGCCAGC TGCCGAAGTTCGAGGGCGACCTGTTCGCGGCCAAGAAGGGCGGCCAGGAGGGCGAGCCCGTGCCCGACGACGCCCAGCTC TACCTCATCCCCACCAGCGAGGTGCCGCTGACCAACCTCGTGCGCGGCGAAGTGGTGCCGGAGAGCGCGCTGCCCATCAG GCTCACGGCGCACTCGCCGTGCTTCCGCTCCGAGGCCGGCAGCTACGGCCGCGACACGCGCGGCATGATCCGCCAGCACC AGTTCGACAAGGTCGAGATGGTGCAGATCGTGCATCCCGACAAGAGCTACGAGGCGCTTGAAGAGATGACGCGCCATGCC GAGGCCGTCCTGCAGAAGCTGGGCCTGCCCTACCGCGTGGTGTGCCTGTGCACCGGCGACATGGGCTTCGGCAGCGCCAA GACCTACGACCTGGAGGTCTGGCTGCCCGCGCAGGGCACCTACCGCGAGATCAGCTCGGTATCCAACTGCGAGGCCTTCC AGGCGCGCCGCATGCAGGCGCGCTTCAAGAACGCGCAGGGCAGGAACGAACTGGTGCACACGCTCAACGGCTCGGGCCTG GCCGTGGGCCGCACGCTGGTGGCGGTGCTGGAGAACTGCCAGCAGGCCGACGGCAGCATTGCCATCCCCGAGGTTTTGCG CCCCTACATGGGCGGGCTGGAGCGGCTCGCGGCCTGA Protein sequence : MLDILLLRKDLASAVARLETRKKPQAFLNVEAFQALESERKTIQTRTEELQSRRNQLSKQIGQLMGKGEKDAAEAAKAQV AAIKEELDGSAARLEQIQSELQAMLAAVPNLPHESVPVGSDEAGNVEVRRWGTPRDFGFAVKDHVDLGAPLGLDFDMGAK LSGSRFTVMKGPIARLHRALAQFMLDVQTGEHGYTECYVPYIVNADSLRGTGQLPKFEGDLFAAKKGGQEGEPVPDDAQL YLIPTSEVPLTNLVRGEVVPESALPIRLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQIVHPDKSYEALEEMTRHA EAVLQKLGLPYRVVCLCTGDMGFGSAKTYDLEVWLPAQGTYREISSVSNCEAFQARRMQARFKNAQGRNELVHTLNGSGL AVGRTLVAVLENCQQADGSIAIPEVLRPYMGGLERLAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-98 | 54 |
