Gene Information

Name : Alide_3344 (Alide_3344)
Accession : YP_004127951.1
Strain : Alicycliphilus denitrificans BC
Genome accession: NC_014910
Putative virulence/resistance : Virulence
Product : lipoprotein releasing system, ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3489502 - 3490188 bp
Length : 687 bp
Strand : -
Note : TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; KEGG: dia:Dtpsy_2754 lipoprotein releasing system, ATP-binding protein; SMART: AAA ATPase

DNA sequence : 
ATGAATGAGTCCACGAACGGGATCGTGCTGCAGGCCCGGGGCCTGGCCAAGCGCTTCACCGAGGGGCGGCTCGACGTGAG
CGTGCTCAGGGGCGTGGATCTGCAGGTGCGCGCGGGCGAGACGCTGGCCATCGTGGGCGCCTCGGGCTCGGGCAAGAGCA
CGCTCTTGCACCTGCTGGGCGGGCTGGACGCGCCGACCGCGGGCACGGTGACGCTCCAGGGCCAGGCGCTGGGCGCGCTC
TCGCCCGGCGCGCAGGGGCGGCTGCGCAACGCGCACCTGGGCTTCATCTACCAGTTCCACCACCTGCTGCCCGAATTCAG
CGCGCAGGACAACGTGGCCATGCCGCTGCGCATACGCCGCATGCCCTATGCGCAGTGCATCGCCCAGGCGGTGCAGATGC
TGCAGGCCGTGGGCCTGGCCGAGCGCGTGCACCACCGGCCGTCGGAGCTGTCGGGCGGCGAGCGCCAGCGCGTGGCCATC
GCGCGCGCCCTGGTCACGCGCCCGGCCTGCGTGCTGGCCGACGAACCCACGGGCAACCTGGACCGCGCCACGGCGGACGC
GGTGTTCCAGCTCATGCTGCGGCTGGCGCGCGAGCAGGGCACGGCGTTCGTGATGGTCACGCACGACGAGACACTGGCGG
CGCGCTGCGACCAAGTGGCGCGGCTGGTGTCCGGCGTCTTGGAGTGA

Protein sequence : 
MNESTNGIVLQARGLAKRFTEGRLDVSVLRGVDLQVRAGETLAIVGASGSGKSTLLHLLGGLDAPTAGTVTLQGQALGAL
SPGAQGRLRNAHLGFIYQFHHLLPEFSAQDNVAMPLRIRRMPYAQCIAQAVQMLQAVGLAERVHHRPSELSGGERQRVAI
ARALVTRPACVLADEPTGNLDRATADAVFQLMLRLAREQGTAFVMVTHDETLAARCDQVARLVSGVLE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-29 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-29 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Alide_3344 YP_004127951.1 lipoprotein releasing system, ATP-binding protein NC_008702.1.4606598. Protein 1e-33 46
Alide_3344 YP_004127951.1 lipoprotein releasing system, ATP-binding protein NC_012469.1.7686878. Protein 3e-37 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Alide_3344 YP_004127951.1 lipoprotein releasing system, ATP-binding protein VFG2059 Protein 2e-14 41