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Name : Alide_3260 (Alide_3260) Accession : YP_004127869.1 Strain : Alicycliphilus denitrificans BC Genome accession: NC_014910 Putative virulence/resistance : Virulence Product : ATP-dependent chaperone clpb Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 3406210 - 3408813 bp Length : 2604 bp Strand : - Note : TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; KEGG: dia:Dtpsy_2550 ATP-dependent chaperone ClpB; SMART: AAA ATPase DNA sequence : ATGCGTCTTGACAAACTCACCACGAAATTCCAGGAAGCCCTGTCCGATGCCCAGTCGCTCGCGCTGGGCCATGACAACGC CTATATCGAGCCCGTGCACCTGCTGGCCGCCATGCTGCGCCAGGAGGACGGCCCGCGCGCGCTGCTGGAGCGCGCCGGCG CCAACGTGCCCGGCCTGCTGAAGGCGTCCGAGGCCGCCATCAAGCGCCTGCCACAGGTGCAGGGCCATGACCAGGTGCAG GCCAGCCCCGAGCTGGGCCGCGTGCTGCAGGCTACCGAGAAGGAGGCCATCCAGCGCGGCGACCAGTTCATCGCAAGCGA GCTGTTCCTGCTGGCCCTCGTGGACAGCAAGGGCGAGGCAGCGCAGATCGCCAAGGACAACGGCCTCACGCGCAAGAGCC TGGAAGCCGCCATCGACGCCGTGCGCGGCGGCCAGAAGGTGGACAGCGCCGAGGCCGAGGGCCAGCGCGAGGCCCTGAAG AAATACACCCTGGACCTGACCGAGCGCGCGCGCCAGGGCAAGCTCGACCCCGTGATCGGGCGCGACGACGAGATCCGCCG CGCCATCCAGGTGCTGCAGCGGCGCAGCAAGAACAACCCCGTGCTGATCGGCGAGCCCGGCGTGGGCAAGACCGCCATCG TGGAGGGCCTGGCCCAGCGCATCGTCGCGGGCGAGGTGCCCGAGACGCTCAAGAACAAGCGCGTGCTGGTGCTGGACATG GCGGGCCTGCTGGCCGGCGCCAAGTACCGCGGCGAGTTCGAGGAGCGCCTGAAGTCCGTGCTCAAGGAAGTGGCGCAGGA CGAGGGCCGCATCATCCTGTTCATCGACGAGATCCACACCATGGTCGGCGCTGGCAAGGCCGAGGGCGCGATCGACGCGG GCAATATGCTCAAGCCCGCCCTCGCGCGCGGCGAGCTGCACTGCATCGGCGCGACCACGCTGGACGAATACCGCAAGTAC ATCGAGAAGGACGCGGCGCTGGAACGGCGCTTCCAGAAAGTGCTGGTCGAGGAGCCCTCGGTGGAGGACACCATCGCCAT CCTGCGCGGCCTGCAGGTGCGCTACGAGGCGCACCATGGCGTGGACATCACCGACCCGGCCATCGTCGCCGCGGCGGAAC TCTCCCACCGCTACATCACCGACCGCTTCCTGCCCGACAAGGCCATCGACCTGATCGACGAGGCGGCTGCGCGCATCAAG ATCGAAATCGACTCCAAGCCCGAGGCGCTGGACAAGCTCGAACGCCGCATGATCCAGCTCAAGATCGAGCGCGAGGCGAT GAAGAAGGAGACCGACGAGGCCTCGCAGAAGCGCCTGCAGCTCATCGAGGAAGAGCTGGCCAACGCCGAGCGCGAGTACG CCGACCTGGAAGAGGTCTGGAAGGCCGAGAAGGCCAGCGCCCAGGGCAGCGAGCAGATCCGCAAGGACATCGACGCGATC CGCATCCAGATCGAGGACCTGAAGCGCAAGGGCGACTACAACCGCGTGGCTGAGCTGCAGTACGGCAAGCTGCCCGAGCT GGAGAAGCGCCTGAAGGAGGCGCAGGACAGCGAGGCCGGCGGCGGCGCGCCCAGGCACCAGCTGCTGCGCACCCACGTGG GCGCGGAGGAGATCGCCGAGGTGGTGAGCCGCGCCACCGGCATCCCCGTGGCCAAGATGATGCAGGGCGAGAAGGACAAG CTGCTACACATGGAGGAAAAGCTGCACGAGCGCGTGGTGGGCCAGGACGAGGCGATCTCCGCCGTGGCCAACGCCATCCG CCGCTCGCGCTCGGGCCTGTCGGACCCCAACAGGCCGCTGGGCAGCTTCCTGTTCCTCGGCCCCACGGGCGTGGGCAAGA CCGAGCTGTGCAAGGCGCTGGCGGGCTTCCTGTTCGACAGCGAAGAGCACATGGTGCGCATCGACATGAGCGAGTTTATG GAAAAGCATAGCGTTGCGCGCTTGATTGGTGCGCCTCCGGGCTATGTTGGCTATGAAGAGGGCGGCTATCTAACCGAGGC CGTGCGGCGCAAGCCCTATTCCGTGCTGCTGCTCGACGAGGTGGAGAAGGCCCATCCCGACGTGTTCAACGTGCTGCTGC AGGTGCTCGACGACGGGCGTCTGACCGACGGCCAGGGCCGCACCGTGGACTTCAAGAACACGGTGATCGTCATGACCAGC AACATCGGCTCGCCGCTGATCCAGGCCATGGTGGGGCAGGACGCCGAGGACATCAAGGAAGCGGTGTGGGGGGAACTCAA GAGCCATTTCCGACCCGAATTCCTGAACCGCATCGACGAGACGGTGGTGTTCCACGGCCTCGACGCGAAACACATCGAAG CCATTGCCCGCATTCAGTTGCGGCTGCTGGAGGCGCGGCTTGCGAAGATGGATCTCTCGCTGCAAGTGTCTCCGGCCGCC ATGGGCGAGCTGGCCAAGGTGGGGTTCGATCCGGTGTTCGGTGCGCGGCCGCTCAAGAGGGCGATCCAGCAGCGTATCGA GAACCCGCTGTCCAGGCTGCTGCTCGAAGGGCGCTATCCGCCCAAGAGCGTGATTCCGGTGGACGTCGATCCTGTGAAGG ATCCAGGGGTATTCCACTTTGGCGAGGCCCGCGCGGCGGGCTGA Protein sequence : MRLDKLTTKFQEALSDAQSLALGHDNAYIEPVHLLAAMLRQEDGPRALLERAGANVPGLLKASEAAIKRLPQVQGHDQVQ ASPELGRVLQATEKEAIQRGDQFIASELFLLALVDSKGEAAQIAKDNGLTRKSLEAAIDAVRGGQKVDSAEAEGQREALK KYTLDLTERARQGKLDPVIGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVAGEVPETLKNKRVLVLDM AGLLAGAKYRGEFEERLKSVLKEVAQDEGRIILFIDEIHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYRKY IEKDAALERRFQKVLVEEPSVEDTIAILRGLQVRYEAHHGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAARIK IEIDSKPEALDKLERRMIQLKIEREAMKKETDEASQKRLQLIEEELANAEREYADLEEVWKAEKASAQGSEQIRKDIDAI RIQIEDLKRKGDYNRVAELQYGKLPELEKRLKEAQDSEAGGGAPRHQLLRTHVGAEEIAEVVSRATGIPVAKMMQGEKDK LLHMEEKLHERVVGQDEAISAVANAIRRSRSGLSDPNRPLGSFLFLGPTGVGKTELCKALAGFLFDSEEHMVRIDMSEFM EKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTS NIGSPLIQAMVGQDAEDIKEAVWGELKSHFRPEFLNRIDETVVFHGLDAKHIEAIARIQLRLLEARLAKMDLSLQVSPAA MGELAKVGFDPVFGARPLKRAIQQRIENPLSRLLLEGRYPPKSVIPVDVDPVKDPGVFHFGEARAAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 3e-106 | 41 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 5e-103 | 41 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 4e-103 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Alide_3260 | YP_004127869.1 | ATP-dependent chaperone clpb | VFG2076 | Protein | 2e-111 | 45 |
| Alide_3260 | YP_004127869.1 | ATP-dependent chaperone clpb | VFG2084 | Protein | 1e-106 | 43 |
