|
Name : Alide_3253 (Alide_3253) Accession : YP_004127862.1 Strain : Alicycliphilus denitrificans BC Genome accession: NC_014910 Putative virulence/resistance : Unknown Product : riboflavin biosynthesis protein ribd Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG1985 EC number : 1.1.1.193 Position : 3398708 - 3399820 bp Length : 1113 bp Strand : + Note : TIGRFAM: riboflavin biosynthesis protein RibD; KEGG: dia:Dtpsy_2542 riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding DNA sequence : ATGACAGACGCTGCCCCCTTCATCACCCAAGCGCTTGGGCTCGCCGCCCAGGCGCTTTTTCTTTCCAACCCCAATCCGCG CGTCGGCTGCGTCATTGCCAGCGGCGCCGGCGCCGTGCTGGGCCAGGGCTTCACCCAGCAGGCCGGCGGCCCGCATGCCG AGGTGGTGGCACTGCGCGACGCGGCGGCCAGCGGCAATGACGTGCGCGGCGCGACGGCCTACGTGACGCTGGAGCCCTGC GCGCACCAGGGGCGCACAGGGCCGTGCTGCGACGCGCTGATCCAGGCCGGCATCGGGCGCGTGGTGGCCTCCATCGAGGA CCCGAATCCCTTGGTAGGCGGGCAGGGCTTCGCGCGGCTGCGGGCGGCGGGCATCGACGTGCAGGTGGGGCCGGGCGCGC AGCAGTCGCGCGAGCTCAACATCGGCTTCTTCAGCCGCATGGTGCGCGGCATGCCCTGGGTGCGCATGAAGGCCGCGGCC TCGCTCGACGGCGTGACGGCGCTGGCCAATGGCACCAGCCAGTGGATCACCGCGCCCGCCGCGCGCGCGGACGGCCATGC CTGGCGCGCGCGCGCCTGCGCGGTGCTGACCGGCATCGGCACGGTGCTGGAGGACGACCCGCTTCTGAACGTGCGCGAGG TGGCCACGCCGCGCCAGCCGCACCTGGTGGTCGTGGACAGCCGGCTGCAGACGCCGCTCGGCGCGCGCCTGTTCGACGTG CCTGGGCGGCGCGTTTTCATCTACGCCGCCGACGGCCCCCCTGACCGGGCGCAGGCGCTGCGGGCGCGCGGCGCCACGGT CATCGTGCTGCCCAATGCGCGCGGCAAGGTGGACCTGCCCGCCATGCTGCGCGACCTGGGCGCGAACGGCGTGAACGAAC TGCACCTGGAGGCGGGCCACAAGCTCAACGGCTCGTTCCTGCGTGAGGGGCTGGTCGATGAGCTGCTGCTGTACCTGGCG CCCTTGCTGCTGGGCAGCGGCGCGCATGGGCTGGCGAGCTGGGGGCCGCTGCAGGCCCTGGCCGATGGCGTGCGCATGGA GTTCCACGGCATGCAGCAGCTGGGCCCGGACCTGCGGCTGATCGCCCGCGTGGCGGGACGGGCCGATTTCTGA Protein sequence : MTDAAPFITQALGLAAQALFLSNPNPRVGCVIASGAGAVLGQGFTQQAGGPHAEVVALRDAAASGNDVRGATAYVTLEPC AHQGRTGPCCDALIQAGIGRVVASIEDPNPLVGGQGFARLRAAGIDVQVGPGAQQSRELNIGFFSRMVRGMPWVRMKAAA SLDGVTALANGTSQWITAPAARADGHAWRARACAVLTGIGTVLEDDPLLNVREVATPRQPHLVVVDSRLQTPLGARLFDV PGRRVFIYAADGPPDRAQALRARGATVIVLPNARGKVDLPAMLRDLGANGVNELHLEAGHKLNGSFLREGLVDELLLYLA PLLLGSGAHGLASWGPLQALADGVRMEFHGMQQLGPDLRLIARVAGRADF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 7e-44 | 43 |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 7e-44 | 43 |
