|
Name : Alide_3160 (Alide_3160) Accession : YP_004127769.1 Strain : Alicycliphilus denitrificans BC Genome accession: NC_014910 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 3294993 - 3296540 bp Length : 1548 bp Strand : + Note : TIGRFAM: lysyl-tRNA synthetase; KEGG: ajs:Ajs_3250 lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type DNA sequence : ATGTCTGAACACAATCACGCCCCCTCCCTCCCGCAAGACGAAAACCAGCTCATCGCCGAGCGCCGCGAGAAGCTCAAGGC CCTGCGCGAGGGCCAGGCCCAGGGCCAGAGCGTGGCGTTTCCCAATGATTTCAAGCCGCAGAACCATGCGGCCAGCCTGC AGCAGCGCTATGGCGCGCTGGATGCCGAGGCGCTGGAGGCGCAGGACGTAGCCGTCAGCGTGGCCGGCCGCATGATGCTC AAGCGCGTCATGGGCAAGGCCAGCTTCGCCACGCTGCAGGACGGCTCGCTCGGCGAGACGGGCGGGCGCATCCAGCTCTA CGTGACGCGCGACGGCGTGGGCGAGGACGTGTACGCCGACTTCAAGCGCTGGGACCTGGGCGACATCGTGGGCGCCGAGG GCACGCTCATGAAGACCAAGACGGGCGAGCTGTCGGTCAAGGTCACGCGCCTGCGCCTGCTCACCAAGAGCCTGCGCCCC ATGCCCGACAAGTTCCACGGCGTGGCCGACCAGGAGGTCAAGTACCGCCAGCGCTACGTGGACCTGATGACCGACGAGGC CGCGCGCCGCCGCTTCGTGGCGCGCAGCAAGGCCATCGGCGGCATCCGCGCGTTCATGATCGAGCACGGCTTCCTGGAGG TGGAGACGCCCATGCTCCACCCCATCCCCGGCGGCGCCAACGCGCGGCCCTTCGTCACGCACCACAACGCGCTGGAGCAG GAGATGTTCCTGCGCATCGCGCCCGAGCTGTACCTCAAGCGCCTCATCGTGGGCGGCTTCGAGCGCGTGTTCGAGATCAA CCGCAACTTCCGCAACGAAGGCATCTCGGTGCGCCACAACCCCGAGTTCACGATGATGGAGTTCTACGCGGCCTACTGGA ACTACCGCGACCTCATGGACTTCACCGAGGAGCTCGTGCGCGACGCGGCGCTCAAGGCCACGGACACGCTGCAGCTGACC TACGGCGGGCGCGCGGTGGACCTGTCCCAACCCTTTGCGCGCCTGACGATCCGCGAGGCCATCTACCAGTACACCGAAGC CGGTGCGCACGTGGACGACGCCGCCTGGCTCGTGAGCGCGCTCAAGAAGCTGGGCATGACCGAGGAGAAGGACCGCCTGT CCACGCGCTCCCTGGCCAGCCTGCAGGTGTTGTACTTCGAGGAGGAGGTGGAGGACAAGCTCTGGCAGCCCACCTTCATC ATGGAGCACCCGACCGAGATCAGCCCGCTCGCTCGCGCCAACGACCTGCGCCCCGAAGTCACCGAGCGCTTCGAGCTCTA CATCACCGGCCGCGAGTTCGGCAACGGCTTCTCCGAGCTCAACGACGCCGAGGACCAGGCCGCACGCTTCAACGCCCAGG TGGCGGCCAAGGACAGCGGCGATGACGAGGCCATGTTCTTCGATCACGACTTCGTGCGCGCGCTGGAGTACGGCATGCCC CCCACGGGCGGCTGCGGCATCGGCATCGACCGTCTGATGATGCTGCTCACCGACAGCCCCAGCATCCGCGACGTCATCCT GTTCCCGGCCCTGCGCCGCGAACAATGA Protein sequence : MSEHNHAPSLPQDENQLIAERREKLKALREGQAQGQSVAFPNDFKPQNHAASLQQRYGALDAEALEAQDVAVSVAGRMML KRVMGKASFATLQDGSLGETGGRIQLYVTRDGVGEDVYADFKRWDLGDIVGAEGTLMKTKTGELSVKVTRLRLLTKSLRP MPDKFHGVADQEVKYRQRYVDLMTDEAARRRFVARSKAIGGIRAFMIEHGFLEVETPMLHPIPGGANARPFVTHHNALEQ EMFLRIAPELYLKRLIVGGFERVFEINRNFRNEGISVRHNPEFTMMEFYAAYWNYRDLMDFTEELVRDAALKATDTLQLT YGGRAVDLSQPFARLTIREAIYQYTEAGAHVDDAAWLVSALKKLGMTEEKDRLSTRSLASLQVLYFEEEVEDKLWQPTFI MEHPTEISPLARANDLRPEVTERFELYITGREFGNGFSELNDAEDQAARFNAQVAAKDSGDDEAMFFDHDFVRALEYGMP PTGGCGIGIDRLMMLLTDSPSIRDVILFPALRREQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 3e-134 | 56 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Alide_3160 | YP_004127769.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 2e-134 | 56 |
