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Name : Alide_3120 (Alide_3120) Accession : YP_004127729.1 Strain : Alicycliphilus denitrificans BC Genome accession: NC_014910 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 3254586 - 3256064 bp Length : 1479 bp Strand : - Note : TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; KEGG: dia:Dtpsy_2565 replicative DNA helicase; SMART: AAA ATPase DNA sequence : ATGACGGGCATCCCTGCGGCCGCTAGCATTCCACGCTTGCCCTCTCTCGAAAGCCATTCCCCCATGTCTGCCGTTCTGCC CGATCTGATCGACGGCTATGCCGCCGCGCCGCCGGACCGCGAGGTCGCCCAGCTGCGCGTGCCGCCGCATTCCATCGAGG CCGAGTCCAGCGTGCTTGGCGGCTTGCTGTTGGACAACATGGCCTGGGACCGCGTGGGCGACCTGCTGGTGGACGGCGAC TTCTACCGCCACGAGCACCAGCAGATCTATTCGGCCATTGGCGCGCTGATCAACGCCAGCAAGCCCGCCGACGTGATCAC GGTGTACGAGCACCTGCAGGGCCTGGGCAAGGCCGAGGAAACCGGCGGCCTGGCCTACCTCAACAGCCTGGCGCAGTACG TGCCCAGCGCCAGCAACATCCGCCGCTACGCCGAGATCGTGCGCGAGCGCGCCATCCTGCGAAAGCTCGTCACGGCCAGC GACGAGATCGCCACCAACGCATTCAACCCCCAGGGCAGGCCGGTCGAGCGCATCCTCGACGAGGCCGAGCAGAAGATCTT CGCCATCGGCGAAGAGGGCTCGCGCATGAAGCAGGGCTTCCAGTCGCTCGACTCGCTGGTGATCGACCTGCTCGACCGCG TGCAGGAGATGGCCGACAACCCCATGGACGTGACCGGCGTGCCCACGGGCTTCATGGACCTGGACCGCATGACCAGCGGC CTGCAGGCGGGCGACCTCGTGGTGCTGGCCGCGCGCCCGTCGATGGGCAAGACCTCGTTCGCGGTGAACATCGCCGAGCA TGTTGCGCTCAACGAGGGCCTGCCCGTGGCCATCTTCTCGATGGAAATGGGCGCGGCGCAGCTCGCGGTGCGTATCGTGG GCTCGATCGGCCGCGTGAACCAGGGCAACCTGCGCACCGGCAAGCTCTCCGACGAGGAGTGGCCGCGCCTGACCGAGGCC ATCGAGCGCCTGCGCACCGTGAGCCTGCACATCGACGAGACGCCCGGCCTCACGCCGTCCGAGCTGCGCGCCAACGCGCG GCGCCTGGCGCGCCAGTGCGGCAAGCTGGGGCTGATCGTGGTGGACTACCTGCAGCTCATGAGCGGCTCGGGCTCCAGCA GCTCCGACAACCGCGCGACCGAGCTCGGCGAGATCTCGCGGGGCCTGAAGATGCTGGCCAAGGAACTGCAATGCCCGGTG ATCGCGCTCTCGCAGCTCAACCGCTCGGTGGAGCAGCGCACCGACAAGCGCCCCATGATGAGCGACCTGCGCGAATCGGG CGCCATCGAGCAGGACGCGGACATCATCATGTTCATCTACCGCGACGACTACTACAACAAGGACAGCAAGGAGCCCAACA TCGCCGAGGTCATCATCGGCAAGCAGCGCAACGGCCCCACGGGCACGGTGAAGCTGTTCTTCCAGAAGAACCAGACGCGC TTCGAGAACCTGGCCATGGGCGCGGGCGACGATTACTGA Protein sequence : MTGIPAAASIPRLPSLESHSPMSAVLPDLIDGYAAAPPDREVAQLRVPPHSIEAESSVLGGLLLDNMAWDRVGDLLVDGD FYRHEHQQIYSAIGALINASKPADVITVYEHLQGLGKAEETGGLAYLNSLAQYVPSASNIRRYAEIVRERAILRKLVTAS DEIATNAFNPQGRPVERILDEAEQKIFAIGEEGSRMKQGFQSLDSLVIDLLDRVQEMADNPMDVTGVPTGFMDLDRMTSG LQAGDLVVLAARPSMGKTSFAVNIAEHVALNEGLPVAIFSMEMGAAQLAVRIVGSIGRVNQGNLRTGKLSDEEWPRLTEA IERLRTVSLHIDETPGLTPSELRANARRLARQCGKLGLIVVDYLQLMSGSGSSSSDNRATELGEISRGLKMLAKELQCPV IALSQLNRSVEQRTDKRPMMSDLRESGAIEQDADIIMFIYRDDYYNKDSKEPNIAEVIIGKQRNGPTGTVKLFFQKNQTR FENLAMGAGDDY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 3e-100 | 52 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 7e-82 | 46 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 7e-82 | 46 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 6e-82 | 46 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 4e-81 | 44 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 4e-83 | 44 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 8e-83 | 44 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 1e-80 | 44 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 9e-68 | 42 |
