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Name : Alide_3057 (Alide_3057) Accession : YP_004127668.1 Strain : Alicycliphilus denitrificans BC Genome accession: NC_014910 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein muts Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 3177147 - 3179759 bp Length : 2613 bp Strand : + Note : SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein; manually curated; KEGG: dia:Dtpsy_1076 DNA mismatch repair protein MutS; TIGRFAM: DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS domain protein; Mut DNA sequence : ATGAACAAAGCAGATTTGACAGAACACACGCCCATGATGGCGCAGTACCTGGCCCTCAAAGCCCAGCACCCGGATACGCT GCTGCTGTACCGCATGGGCGACTTCTACGAGCTGTTCTACGCCGACGCGGAGAAGGCCGCGCGCCTGCTGGACATCACCC TGACGCAACGCGGCCAGTCGGCGGGCCAGCCCGTGACCATGGCGGGCGTGCCCTTCCATGCGCTGGAGAACTACCTGGGC CGGCTCATCCGGCTGGGCGAATCCGTGGCCATTGCCGAGCAGGTGGGCGAGGTGGGTGCGGCCAAGGGGCCGGTGGAGCG CAAGGTGGTGCGCGTGGTCACGCCCGGCACGCTGACCGACAGCGAGCTGCTGCCCGACAAGAGCGAGTCCGTGCTGTTGG CCGTGCACCAGGGCGCGCGCGCGCGCTGCGGCCTGGCCTGGCTGGCCGTGACGCAGGGCGTGGTGCAGCTGGCCGAATGC ACGCAGGCCGAGCTGGGCGCCTGGCTCGCGCGCATCGCGCCCAGCGAGCTGATCCACAGCGCGGGCATCACGCAGCGCTT CGAGGAACAGCTCGCCGGACTGCGCCAGGGCGGCATGTTCGCCTGCCCCATGAGCCTGCGCCCCGACTGGCAGTTCGACG CCGCCCTGGGCCGGCGCAAGCTGCTCGAACACCTGGGCGCGGCCAGCCTGCAGGCCTGGAATGCCGAGGGCCTGCAGGAC GCGCACGCCGCCGCCGCCGCGCTCCTGCAGTACGCCGAGCACACGCAGGGCCGCGCACTCAGCCACGTGCACGGCGTGCG CGTGCAGCAGAGCGACGAGCTGATCCACCTGCCGCTGGCCACGCGGCGCAACCTGGAGCTGGTCAAGACCCTGCGCGGCG AGGACGCGCCCACGCTGTTCTCGCTGCTGGACACCTGCATGACCGGCATGGGCAGCCGCCTGCTCAAGACCTGGCTGCTG GAGCCGCGGCGCGACCGCGGCGACGCGCGCCGGCGCCTGGCCGCCACCCAGGCCCTGCGCGGCACCGGCGGCGGCCAGGG CCCCTGGCAGCTGCTGCGCGGCGCGCTCAAGGGCGTGAGCGACGTGGAGCGCATCACCGCCCGCATCGCGCTGCGCCAGG TGCGCCCGCGCGAGCTGGTGGCGCTGTGCAGCACACTACAGAAATCAGAGCTGCTGGCGCAGTCCAGTCAAGCGCCAGAG GCCTTTTTGGCTCAAATATTCAACGACCTGCAGCCCCCGGCGGAATGCACGGCGCTGCTGCGCGCCGCCATCCTGGAGGA GCCCGCCGCCCTGGTGCGCGACGGCGGCGTGATCGCCCCGGGCTTCGACGCCGAGCTCGACGAGCTGCGCGCCATACAGA ACAACTGCGACGGTTTCCTGCTCGACCTGGAGACGCGCGAGAAGGTGCGCACCGGCATTCCCAACCTGCGCGTGCAGTTC AACAAGGTGCACGGCTTCTACATCGAGGTCACCAGCAGCCACGTGGACAAGGTGCCGGGCGACTACCGCCGCCGCCAGAC GCTCAAGAACGCCGAACGCTTCATCACGCCCGAGCTGAAGAGCTTCGAGGACAAGGCCCTGTCGGCGCAGGAGCGCGGCC TGGCGCGCGAGAAGTGGCTGTACGAGCAGGTGCTGGACCAGCTCCAGCCCCACGTGCCGCGGCTCACGCGCCTGGCCCAG GCCCTGGCCGCGCTGGACGTGCTGTGCTGCCTGGCCGAGCGCTCGCTCACGCTCGACTGGTGCGCGCCGCAGTTCGTGGC CGAGCCCTGCATCGACATCGAGGCCGGGCGCCACCCGGTGGTGCAGGCGCGCCTGGCCGAAACCTCCAGCGGCGCCTTCA TCCCCAACCACACGCGGCTGAACGCCAACACGCGCATGCAGATCATCACCGGCCCCAACATGGGCGGCAAATCGACCTAC ATGCGCCAGGTGGCGCTGATCGTGCTGCTGGCCAGCATGGGCAGCCACGTGCCGGCCACGGCCTGCCGCCTGGGGCCGAT AGACGCCATCCACACGCGCATCGGCGCCGCCGACGACCTGGCGAATGCCCAGTCCACCTTCATGCTGGAGATGACCGAGG CGGCGCAGATCCTGCACGCGGCCACGCCGCACAGCCTGGTGCTGATGGACGAGATCGGCCGCGGCACCAGCACCTTCGAC GGCCTGGCGCTGGCCAGCGGCATCGCCACGCACCTGCACGACCGCACCAAGGCGTTCACGCTGTTCGCCACGCACTACTT CGAGCTCACCGAGCTCTCGGCGCGCCACCAGCACGCGGTGAACGTGCACGTGGGCGCCACCGAGTCGGGGCACGACATCG TCTTCCTGCACGAGATCCAGCCCGGCCCGGCCAGCCGCAGCTACGGCATACAGGTGGCCAAGCTGGCCGGCGTGCCCGCC GCCGTGCTGCACCACGCGCGCCACACGCTGGCCGCGCTGGAGGAGCGCGCGGGCGAGGACGACCTGCAGGTGGACCTGTT CGCCCCGCCGCCCGCGCCCGAGGTGCAGGCGGTGAGCCCCGTGGAGGCGGCCCTGGCGCAGATCAACCCCGATGCGCTGA GCCCGCGCGAAGCGCTGGACGCGCTGTACCAGCTCAAGCGGCTGGCGCCGTAG Protein sequence : MNKADLTEHTPMMAQYLALKAQHPDTLLLYRMGDFYELFYADAEKAARLLDITLTQRGQSAGQPVTMAGVPFHALENYLG RLIRLGESVAIAEQVGEVGAAKGPVERKVVRVVTPGTLTDSELLPDKSESVLLAVHQGARARCGLAWLAVTQGVVQLAEC TQAELGAWLARIAPSELIHSAGITQRFEEQLAGLRQGGMFACPMSLRPDWQFDAALGRRKLLEHLGAASLQAWNAEGLQD AHAAAAALLQYAEHTQGRALSHVHGVRVQQSDELIHLPLATRRNLELVKTLRGEDAPTLFSLLDTCMTGMGSRLLKTWLL EPRRDRGDARRRLAATQALRGTGGGQGPWQLLRGALKGVSDVERITARIALRQVRPRELVALCSTLQKSELLAQSSQAPE AFLAQIFNDLQPPAECTALLRAAILEEPAALVRDGGVIAPGFDAELDELRAIQNNCDGFLLDLETREKVRTGIPNLRVQF NKVHGFYIEVTSSHVDKVPGDYRRRQTLKNAERFITPELKSFEDKALSAQERGLAREKWLYEQVLDQLQPHVPRLTRLAQ ALAALDVLCCLAERSLTLDWCAPQFVAEPCIDIEAGRHPVVQARLAETSSGAFIPNHTRLNANTRMQIITGPNMGGKSTY MRQVALIVLLASMGSHVPATACRLGPIDAIHTRIGAADDLANAQSTFMLEMTEAAQILHAATPHSLVLMDEIGRGTSTFD GLALASGIATHLHDRTKAFTLFATHYFELTELSARHQHAVNVHVGATESGHDIVFLHEIQPGPASRSYGIQVAKLAGVPA AVLHHARHTLAALEERAGEDDLQVDLFAPPPAPEVQAVSPVEAALAQINPDALSPREALDALYQLKRLAP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 4e-155 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Alide_3057 | YP_004127668.1 | DNA mismatch repair protein muts | VFG0562 | Protein | 1e-167 | 48 |
