Gene Information

Name : Alide_3011 (Alide_3011)
Accession : YP_004127624.1
Strain : Alicycliphilus denitrificans BC
Genome accession: NC_014910
Putative virulence/resistance : Unknown
Product : k+-transporting atpase, b subunit
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2216
EC number : -
Position : 3123012 - 3125036 bp
Length : 2025 bp
Strand : -
Note : KEGG: tgr:Tgr7_1888 potassium-transporting ATPase subunit B; TIGRFAM: K+-transporting ATPase, B subunit; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydro

DNA sequence :
ATGAGTACGACACATGCAGCCTCCTCCACCCGCGTGGGCAGTTCTCTGAAGCCCGCGCTGATCGGTTCCTTCGCCAAGCT
GGCGCCCCGGCATGCCATCCAGAACCCGGTGATGGCGGTGGTGTGGCTGGGCACCGTGCTGACCGCCGTTGCCACCATCG
CGGGCTGGACGAGCACCGGCTTCGGCTGGGCCGTCACGGCCATCCTGTTCGTCACCGTGCTGTTCGCCAACTTCGCCGAG
GCGGTGGCCGAGGCGCGCGGACGCGGCCAGGCCGCCTCGCTGCGCCGGGCCCGCAAGGACCTGGTGGCGCGCCGGCTGGA
CAAGGCGGGCCGGGAGAACACCGTCCCCGCTGCGGAATTGCGCCCGGGCGACCTGGTGGTGGTCGCGGAAGGCCAGCTGG
TCCCGGCCGACGGGGAGATCGTCGAGGGCCTGGCGACCATCAACGAGGCCGCCGTCACCGGCGAGTCCGCGCCCGTGCTG
CGCGAGGCGGGCACCGACCGTTCCGGCGTGATCGGCGGCACCAAGGTGCTGTCCGACCGCATCGTCGTGCGCGTCACGGC
CGAGTCCGGCCACAGCTTCCTGGACCGCATGATCGCGCTGGTCGAGGGCTCCGTGCGGCAGAAGACGCCCAACGAGATCG
CGCTGGGCATCCTGCTGGCGGTGATGACGCTGAGCTTCCTGATCGTGGTCGCCACGCTGCCCTTCATCGGCGGCTTCGTG
GGCGTGCGGGTCGACGTCGTGCTGCTGGTGGCCCTGCTGGTGTGCCTGATCCCGACCACCATCGGCGGCCTGCTGCCGGC
CATCGGCATCGCGGGTATGAACCGCGCGCTGAGGGCCAACGTGCTGGCCAAGTCCGGCAAGGCGGTGGAGGTGGCCGGCG
ACGTGGACGTGCTGCTGCTGGACAAGACCGGCACCATCACCTACGGCGACCGGCAGGCCACGGCCTTCCACCCGCTGGCC
GGGGTGAATGCGGCGCAACTGCGTCAGGCCGCGTTGCTGGCCTCCCTGGCCGACCCCACGCCCGAGGGAAAATCCATAGT
CAGGCTCGCGCGGGAGAAGGGCGAGAAGCTTGTGGACCCGGAGCAGGCCCACTTCGTGCCCTTCACGGCGCAGACGCGCA
TGTCGGGTGTGGACCTGCCCGCCGGCCGCGTGATCCGCAAGGGCGCGATGGATGCGATCGTCCGGCACGTCGCGGCGCTC
GAAGGCCATGCGCCAGCCGAGCTGGAGGCGCGCGTGCACGAGGTGGCGCGCAAGGGCGCCACGCCGCTGGTGGTGAGCGA
TGGCCGGCATGTGCTGGGCGTGGTCGAGCTGTCCGACGTCATCAAGCGCGGCATCAAGGAGCGCTTCGCCCGCCTGCGCG
AGATGGGCGTCAAGACGGTGATGATCACCGGCGACAACCCGCTCACGGCAGCGAGCATCGCCGCCGACGCCGGGGTGGAC
GACTACATCGCCGAGGCCCGGCCCGAGGACAAGCTGGCTCGCATCCGCGCCGAGCAGGCCGGCGGGCGGCTCGTGGCCAT
GGTGGGCGACGGCACCAACGACGCGCCCGCGCTGGCGCAGGCCGACGTGGGCCTGGCGATGAACTCGGGCACGCAGGCGG
CCAAGGAGGCCGGCAACATGGTAGACCTGGACTCCGACCCGGCCAAGCTGCTGGCGGTGGTGGAGATCGGCAAGCAGCAG
CTCATCACGCGCGGCGCGCTGACCACCTTCTCGCTGGCCAACGACGTGTCCAAGTACTTCGCCATCCTGCCGGCGCTGTT
CGCGGCAAGCGTCCCGCAGATGGCCGCGCTTGACGTAATGCGGCTGTCCAGCCCGGCCAGCGCGGTGCTGTCGGCGCTGG
TCTTCAACGCCCTCATCATCCCGGCGCTGATACCGCTGGCGCTGCGCGGCGTGCGCTTCAGACCCGCGAGCGCGACCGAG
CTGCTGCGCAACAACATGCTGGTCTACGGCGTGGGGGGCGTGCTGCTGCCTTTCATCGGGATCAAACTCATCGACATCGT
GCTGTCCGCGATGTTCAATCTCTGA

Protein sequence :
MSTTHAASSTRVGSSLKPALIGSFAKLAPRHAIQNPVMAVVWLGTVLTAVATIAGWTSTGFGWAVTAILFVTVLFANFAE
AVAEARGRGQAASLRRARKDLVARRLDKAGRENTVPAAELRPGDLVVVAEGQLVPADGEIVEGLATINEAAVTGESAPVL
REAGTDRSGVIGGTKVLSDRIVVRVTAESGHSFLDRMIALVEGSVRQKTPNEIALGILLAVMTLSFLIVVATLPFIGGFV
GVRVDVVLLVALLVCLIPTTIGGLLPAIGIAGMNRALRANVLAKSGKAVEVAGDVDVLLLDKTGTITYGDRQATAFHPLA
GVNAAQLRQAALLASLADPTPEGKSIVRLAREKGEKLVDPEQAHFVPFTAQTRMSGVDLPAGRVIRKGAMDAIVRHVAAL
EGHAPAELEARVHEVARKGATPLVVSDGRHVLGVVELSDVIKRGIKERFARLREMGVKTVMITGDNPLTAASIAADAGVD
DYIAEARPEDKLARIRAEQAGGRLVAMVGDGTNDAPALAQADVGLAMNSGTQAAKEAGNMVDLDSDPAKLLAVVEIGKQQ
LITRGALTTFSLANDVSKYFAILPALFAASVPQMAALDVMRLSSPASAVLSALVFNALIIPALIPLALRGVRFRPASATE
LLRNNMLVYGVGGVLLPFIGIKLIDIVLSAMFNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 2e-137 55
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 2e-137 55
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 2e-137 55
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 2e-137 55
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 2e-137 55
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 4e-138 55
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 4e-137 54
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 3e-137 54