Gene Information

Name : Alide_3008 (Alide_3008)
Accession : YP_004127621.1
Strain : Alicycliphilus denitrificans BC
Genome accession: NC_014910
Putative virulence/resistance : Virulence
Product : response regulator receiver
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3118906 - 3119616 bp
Length : 711 bp
Strand : -
Note : KEGG: tgr:Tgr7_1884 response regulator receiver protein; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver

DNA sequence :
GTGACCCACCCGCCCGGCGGCCCGGCCGCGCGCGTGCTCGTCATCGACGACGAGCCACAGATCCGCAAGTTCATCGACAT
CAGCCTGCGTTCGCAGGGCTATGCCACGCTGCTGGCGGAGACCGGCCTGCAGGGCCTGGCGCTGCTCGCGAGCCAGGGCG
CGGACATCGTGGTGCTGGACCTGGGCTTGCCCGACCGCGACGGCAAGGAGGTGCTCGAGGAGCTGCGCCAGTGGTCGCGC
GTGCCGGTCATCGTGCTCACCGTGCGCTCCGGCGAGGAGGAAAAGGTGGCACTGCTGGACGCGGGGGCCAACGACTACGT
GACCAAGCCGTTCGGCATCGGCGAGCTCATGGCGCGCATCCGCGCCTTCCTGCGTACGACGGCGCTGTCCGGTGAGGAAG
GCCCGGTCTACGACGACGGCACGCTGTGCATCGACCTCGCCCGGCGCAAGGTGCACCTGCGGGGGCAGGCGGTGGCGCTC
ACGCGCAAGGAGTTCGCGCTGCTGGCCCTGCTGGCACGCCAGCCCGGGCGGCTCGTGACCCAGACGCAACTGCTGCGGGA
GATGTGGGGGCCGACCCACCAGGAGGATGCCCACTACCTGCGCGTCCTCGTGGGCAAGCTACGCCACAAGCTGGGGGACG
ACGCATCGGCGCCGCGCTACATCGTGACCGAGCCTGGGGTGGGGCTGCGGTTCGTTGCGCAGGAGCGGTAG

Protein sequence :
MTHPPGGPAARVLVIDDEPQIRKFIDISLRSQGYATLLAETGLQGLALLASQGADIVVLDLGLPDRDGKEVLEELRQWSR
VPVIVLTVRSGEEEKVALLDAGANDYVTKPFGIGELMARIRAFLRTTALSGEEGPVYDDGTLCIDLARRKVHLRGQAVAL
TRKEFALLALLARQPGRLVTQTQLLREMWGPTHQEDAHYLRVLVGKLRHKLGDDASAPRYIVTEPGVGLRFVAQER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 2e-38 42
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 3e-38 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Alide_3008 YP_004127621.1 response regulator receiver VFG1390 Protein 4e-25 41