Gene Information

Name : Alide_2912 (Alide_2912)
Accession : YP_004127527.1
Strain : Alicycliphilus denitrificans BC
Genome accession: NC_014910
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 3014011 - 3015504 bp
Length : 1494 bp
Strand : +
Note : PFAM: Aldehyde Dehydrogenase; KEGG: bur:Bcep18194_C7306 aldehyde dehydrogenase (acceptor)

DNA sequence :
ATGACCGTTGCACCCCCCTCCCCCGCCGAAGCCGCGCGCGCCCAGGCGATCGCCTGGATCGGCCAGGCCCCGAAGCGCCT
GCTGATCGGCGGCCAGTGGGTCGATGCCGTATCGGGCAAGACCTTCGAGACCCTCAACCCCGCCACCGAGCAGCTGCTGT
GCCGCGTGGCAGAGGCCGAACAAGCGGATGTGGACGCCGCCGTCGCGGCCGCGCGCAAGGCGTTCGAAGCGCCCTCGTGG
TCTGCCATGTCGCCCCACTCCCGCACGCGCGCGCTGCTCAGGATCGCCGACAAGGTCGAGGCGCATATCCCCGAGCTGGC
CGCCATCGAGTCGCTCGACAACGGCATGCCGCTCTGGTACGCCACGGCGGCGGCCACGGCCTGCGCGGACATCTTCCGCT
ACTACGCGGGCTGGTGTTCCAAGGTGCTGGGCACCACCATCCCTTCGGATGGCAGCACGCTGATCTACACGCTGCGCGAG
CCGCTGGGCGTGTGCGGCCAGATCATCCCGTGGAACGTGCCGGTGCTCATGGCCTCCATCAAGTTCGCCAATGCGCTGTG
CTGCGGCAACACCGTGGTGCTCAAGCCCGCCGAGCTGGCGTGCCTGACCTCCATCCGCCTGGCCGAGCTGATCCAGGAGA
CGGACCTGCCCCCCGGCGTCATCAACGTGCTGCCGGGCTTCGGCCCCACGGCGGGCGCGGCGCTGGCGCAGCACCTGGGC
GTGGACAAGATCGCCTTCACCGGCTCCACGGCCGTGGGCAAGCAGGTGGTGCGCGACGCCACCAGCAACCTCAAGAAGGT
GACGCTGGAGCTCGGCGGCAAGGCGCCCAACGTGGTGTTCGCCGATGCCGACCTGGACAAGGCCATCGCCACGGCCGTCA
AGACCTTCTGCGGCAACTCGGGCCAGGTGTGCTCGGCCGGCACGCGCCTGTTCGTGCAGGAGAGCATCCACGACGAGGTG
GCCGAGCGCGTGGCCAGTGAGGCCGCCACGTGGAAGGCGGGCGACCCGTTCGCGGCCGACACCAAACTGGGTCCGCTGAT
CTCCGCCAGGCAGCGCGACCGCGTGTGGTCCTACATCGGCGCGGGCCAGGAAAGCGGCGCCGCGCTGCGCCTGGGCGGCA
AGGCGTGGAACGGCCCGGGCTACTTCGTCGAGCCCACGGTGTTCGACAACGTGAAGAACGGCATGAAGATCGCGCAGGAG
GAGATCTTCGGCCCCGTGCTCTCGATCATCCCGTTCAAGGACGAGGACGACGCGGTGCTGCAAGGCAACGAAACGACCTA
CGGCCTCTCGGCCGCCGTGTGGACGCGCGACGTCTCGCGCGCGCACAAGGTCGTCAAGGCGCTCAAGGCCGGGCGCCTGT
GGATCAACACCTTCGGCGAGGCCGATCCCGCCATGGCCTTCGGTGGCTACAAGCAGTCGGGCTGGGGGCGCGAGTTCGGC
GCGGAGTCCATCGAGGCGTACACGCAGGCCAAGTCGGTGATGGTGCGGCTCTGA

Protein sequence :
MTVAPPSPAEAARAQAIAWIGQAPKRLLIGGQWVDAVSGKTFETLNPATEQLLCRVAEAEQADVDAAVAAARKAFEAPSW
SAMSPHSRTRALLRIADKVEAHIPELAAIESLDNGMPLWYATAAATACADIFRYYAGWCSKVLGTTIPSDGSTLIYTLRE
PLGVCGQIIPWNVPVLMASIKFANALCCGNTVVLKPAELACLTSIRLAELIQETDLPPGVINVLPGFGPTAGAALAQHLG
VDKIAFTGSTAVGKQVVRDATSNLKKVTLELGGKAPNVVFADADLDKAIATAVKTFCGNSGQVCSAGTRLFVQESIHDEV
AERVASEAATWKAGDPFAADTKLGPLISARQRDRVWSYIGAGQESGAALRLGGKAWNGPGYFVEPTVFDNVKNGMKIAQE
EIFGPVLSIIPFKDEDDAVLQGNETTYGLSAAVWTRDVSRAHKVVKALKAGRLWINTFGEADPAMAFGGYKQSGWGREFG
AESIEAYTQAKSVMVRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 7e-75 46
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-73 44
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-76 44
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-76 44
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-76 44
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-76 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Alide_2912 YP_004127527.1 aldehyde dehydrogenase VFG0082 Protein 2e-73 44