Gene Information

Name : Alide_2725 (Alide_2725)
Accession : YP_004127343.1
Strain : Alicycliphilus denitrificans BC
Genome accession: NC_014910
Putative virulence/resistance : Unknown
Product : LysR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0583
EC number : -
Position : 2817208 - 2818104 bp
Length : 897 bp
Strand : -
Note : PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rpf:Rpic12D_0633 transcriptional regulator, LysR family

DNA sequence : 
ATGGATTTACGCCATATCCGGGCCTTTGTCGCGGTGGCCGAGGAACTGCACTTCGGCCGTGCTGCCAAGCGCCTGCACAT
TGAGCAGTCGCCTTTGTCCCGCACTATTCGCGCGCTGGAGACAGACTTGGGAGTGGTGCTGCTCCGGCGCACGGCGCGCG
GTGCCAGCCTGACTTGGGCCGGACAGATCTTCCTGCAGGATGCCCGCCGCATCATGCTGGCCGTCGAGCAGACTGAAGCC
AGAGCGCGCGCCGCGGCCGAGGGGTGTCAGGATACGCTGCGCATTGCACTTGCAGGCGACATCGGACGGTCTCGGTTGTC
GACGTTGCTCGCACTGTGCCGGCAGGAAGCTCCGCAGGTGAACATCCGTCTATCCGAGATGCCAATAGCCCAACTGGTGC
ATGGATTGAACTCGGACTTGTTCGATGCCGGCTTTGCAATGATCGACGACGTGGGCGCGGGGATCATTGCTACGCCGGTG
TGGGTAGACCCATTGATGGTCGCACTGTCCGCACGACATCCGCTGCTGGTCTTCAAGGAGGTACCGCTGGAAGAAGTGGT
GAGATACCCGCTGGTGCTGTGCGATCCACAGAGCTGTAAAGGCTGCAGACAGCAGCGTGAACGCCTATTCCGGTCATTCG
AGGTGCGGCCGATGGTGGACGAGTACATCACCACCCATGGTCTGATGCTGACGTTGGTGGCGGCGGGGTACGGGGTCGGC
TTTTCGAGCGCTGCACATTTTGCGGGCTGCCAACAGGCAGACGTGGTAGCCCGGCCGCTGGTTGATCGGACGGCATCGCT
GACCACCTATCTGCTGCGACCAGAAAGAGGCATGGGAAAAGCGTTGAGGCAGTTCATCGAACATGCGAAGCGTGTCGGGT
TGCCTTCAGGCGCTTGA

Protein sequence : 
MDLRHIRAFVAVAEELHFGRAAKRLHIEQSPLSRTIRALETDLGVVLLRRTARGASLTWAGQIFLQDARRIMLAVEQTEA
RARAAAEGCQDTLRIALAGDIGRSRLSTLLALCRQEAPQVNIRLSEMPIAQLVHGLNSDLFDAGFAMIDDVGAGIIATPV
WVDPLMVALSARHPLLVFKEVPLEEVVRYPLVLCDPQSCKGCRQQRERLFRSFEVRPMVDEYITTHGLMLTLVAAGYGVG
FSSAAHFAGCQQADVVARPLVDRTASLTTYLLRPERGMGKALRQFIEHAKRVGLPSGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
bphR AAN62138.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 3e-66 51
bphR AAN62326.1 putative transcriptional regulator Not tested PAGI-3(SG) Protein 9e-56 42