Gene Information

Name : Alide_2720 (Alide_2720)
Accession : YP_004127338.1
Strain : Alicycliphilus denitrificans BC
Genome accession: NC_014910
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : K : Transcription
COG ID : COG1475
EC number : -
Position : 2812730 - 2814403 bp
Length : 1674 bp
Strand : -
Note : KEGG: rpf:Rpic12D_0638 hypothetical protein

DNA sequence :
GTGGCTGACCTGACGCCGCAGGACATGGCCGCCAAGCTGCTGGCCTCGGGCTTCGAGCGCAACTGCCCTTCGGTCGCGGC
CCTGAGCGACCCCATCGCCGACACGCCGATGGTGGTGACGCTGGACCAGTTGCGCCCCTACGACCACGACCCGCGCGTGA
CGCGCAACCCGGCTTACGAGGACATCAAGGCCTCGATCCGCGAACGCGGGCTGGATGCGCCGCCCGCGATCACGCGCCGG
CCCGGCGAGCCGCACTACATCATCCGCAACGGCGGCAACACGCGCCTGGCGATCCTGCGCGAGCTGTGGAGCGAGACGAA
AGACGAACAGTTCTTCCGCATCCCCTGCCTGTTCCGCCCATGGCCGCAGCGCGGCGAAGTGGTGATGCTGACCGGGCACT
TGGCCGAGAACGAGCTGCGCGGCGGGCTCAGCTTCATCGAGCGGGCCTTGGGCGTGGAGAAGGCGCGCGAGTTCTACGAG
CAGGAAAGCGGCCAGGCGCTGTCGCAGAGCGAGCTGGCGCGGCGGCTCACGGCCGATGGCTTCCCGCTGCCACAGTCGCA
CATCAGCCGCATGCAGGACGCCGTGCACTACCTGCTGCCGGCGATCCCGACGCTGCTGTACGGCGGCCTCGGCCGGCATC
AGGTGGAACGGCTCGCAGTGCTGCGCAAGGCCTGCGAACGCACCTGGGAGCGGCGTGCCTTGGGCTGCAACCTGTCGGTG
GACTTCGCCACGTTGTTTCAGGACGTGCTCAGCCAGTTCGACACGCAGCCCGACAACTTCTCGCCGCAGCGGGTGCAGGA
CGAGCTGGTCGGCCAGATGGCCGAGCTGCTGGGAGTGGACTACGACACGCTGAGCCTGGAGATCGACGACAGCGAGAGCC
GGCAGCGCGCATTGACCAGTGATCCCGCGCCGCTGCAGGCGGCAAGGCCTGCGGTGCCGGCGGGGTCTTCGGCCGAGCCA
CCGCGACCACCGTCACCGCCTTCGCCGCCGACCGGCCCCTCGGTGCAGTCGTCGGAGCCTGGCGCTGGTCAGGCTGCGCA
GGCCGATTCCACGCCGGCCGCCAGCGACAAGGGCATGCAGCAGGATGATGGGCTGCGCGACGAGCGCCTGCAGGGTCACA
TCGTGTCCCCGGCCCCGACCACCGAACGCCTGCAATCCATCCAGCGCATGGTGGCCGATCAGATGGGCGACAAGCTGCCC
GACTTCGAGGTCGACGCGCTGCGTGCAATCCCCGTGCAGGCGGGCGGGCTCTATCCCATCTCGGACGTCTGGTACATCGA
GCCCGGCCTGGACGTGCCGGATCGGCTGCGGGTGCACATCGCGCAGTTCGCGCGCGAGATCGCCGAGGAAGCCGACGTGG
CCGGGCAGGTCGAGCCCAGCGAAGGCGGCATCGGCTTCGTCTGCGTGGCGCCTCCGGCGGTGCGCGCATTGCCACCGTTC
GCGCGTGCGGTGCTGACCTTGCTGCATGCGCTATGCGCCGCGCCCCAACCCGCAACCGGCCTCGATGGCGCCCGGCTGGC
CGACGACTTGGCGGCCTTGCTGCATGGCGGCGGCACATATCCGCGCCTGAGCGATGCCGGGCTGGTAAAGCTGTTCCGGC
TGCTGCGCCTGGCGCGCCGGCTGCTGAACCTGGAGACCGGCGCGGCCTCCAGCAACCCCGGCCACGGCGCCTGA

Protein sequence :
MADLTPQDMAAKLLASGFERNCPSVAALSDPIADTPMVVTLDQLRPYDHDPRVTRNPAYEDIKASIRERGLDAPPAITRR
PGEPHYIIRNGGNTRLAILRELWSETKDEQFFRIPCLFRPWPQRGEVVMLTGHLAENELRGGLSFIERALGVEKAREFYE
QESGQALSQSELARRLTADGFPLPQSHISRMQDAVHYLLPAIPTLLYGGLGRHQVERLAVLRKACERTWERRALGCNLSV
DFATLFQDVLSQFDTQPDNFSPQRVQDELVGQMAELLGVDYDTLSLEIDDSESRQRALTSDPAPLQAARPAVPAGSSAEP
PRPPSPPSPPTGPSVQSSEPGAGQAAQADSTPAASDKGMQQDDGLRDERLQGHIVSPAPTTERLQSIQRMVADQMGDKLP
DFEVDALRAIPVQAGGLYPISDVWYIEPGLDVPDRLRVHIAQFAREIAEEADVAGQVEPSEGGIGFVCVAPPAVRALPPF
ARAVLTLLHALCAAPQPATGLDGARLADDLAALLHGGGTYPRLSDAGLVKLFRLLRLARRLLNLETGAASSNPGHGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C107 AAN62200.1 conserved hypothetical protein Not tested PAGI-2(C) Protein 9e-162 68
ORF SG102 AAN62323.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 2e-156 63
pph07 CAI36048.1 hypothetical protein Not tested PPHGI-1 Protein 6e-117 48
unnamed ABR13448.1 hypothetical protein Not tested PAGI-5 Protein 5e-103 46
RL102 AAP84227.1 conserved hypothetical protein Not tested PAPI-1 Protein 2e-101 46