Gene Information

Name : Alide_2718 (Alide_2718)
Accession : YP_004127336.1
Strain : Alicycliphilus denitrificans BC
Genome accession: NC_014910
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2810921 - 2812153 bp
Length : 1233 bp
Strand : -
Note : KEGG: rpf:Rpic12D_0640 hypothetical protein

DNA sequence :
ATGGCGACGGGCGGCGCACCACGGCGCGATGGCCCCGTTGCGCTGTCCGCGTTGTTCGACGGCGCGCTGCGGCAACTGTT
GCCCTCTGCGCAGCCGGCCGGGTACGGCACGGCCACGGCGCAAGCTGCTGCGCCGGCCAGCGACGGCTTTCTCTACAGCG
GGAACCGCCATGAGAGCGTGCCGCGTGCGCTGTTCCTCGATCGGCGCCTGACGCCGCTGGAGCGCAATGCCTGGCAGGTG
TTCCGCCTGCAGCTCAACGACGACGGCGTGACGGCTTTCCCGACCTACGACCAGCTTCGCCCCTACCTCACCTCGATGCC
CTGTGCGGCGCAGGCCTCGCACGAGACCGTGGCGCGCGCCTTGACGCTGCTGCGGCTGACGCGCTGGCTGAGCCTGGTGC
GGCGGCGTCGCGATCCGAAGACCGGCCGCATCCTCGGCAACCTCTATGTCCTGCACGACGAACCGCTGACGCCCTTCGAG
GCGATGCAGCTCGACCCCGACTACCTGGGCTTGGTCAGCCAGGCGCTGACCCATGCTGCCAAGGCAGTTCAGATCGTCGG
CATGAACACGCTGCGCGAGATCGCCGAAGACCCGATGCTCAACGGCCGCACGCTGCCCACGCGCCTGCAGGTGCTAGCAC
AGCGCATGGCCCGGCATGGCTGGGCCGAGGGGAGTTATCCACAAGAGGCTGTGGATCACGATTCCGAAGAAGGCCAGGAC
GGCTTGCTTCGGAATGTCGATCGCCCGTCTTCGGAATCCGAAGCAGGGTCGAAACCCGCGCCAGACGGCTCACTTCGGAA
TCCGAAGGAGGACCGTACTGTACGTATGGATCGTATAAATCAAATACGTACAGTACCGCGCGCGAAGGCGCTGCAGCACT
TGCGCCTGCCCGAGCGCCTGCTGCGCCTGAAGGACGAGCAGCAAAGCGGCGCGCTGGTGGCCTTACAGCAGGTGGACGAG
TCCCTGCGGCAGGCGGTGCTGGACGAATGGGATGCGCGCTGCCGCAACAGCGCGGTGCGCAACCCGGCCGGCTACCTGTT
CGGCATCATCCAGAAGGCGATTCGCGGGGAGTTCAAGGCCTGGGCGGGCGAAGGCGGCTCGTCATCGACGCCGCCACCGC
CGCATGCACCGCCGCGGCCAGCAGAACCCCCACCCCCTGCACCGAACGGCCCTGGCCGCGAGGCGGCGCGGGCCTACCTG
GCGAAGCTGCGTTCTACGCTCGGCGATTCCTGA

Protein sequence :
MATGGAPRRDGPVALSALFDGALRQLLPSAQPAGYGTATAQAAAPASDGFLYSGNRHESVPRALFLDRRLTPLERNAWQV
FRLQLNDDGVTAFPTYDQLRPYLTSMPCAAQASHETVARALTLLRLTRWLSLVRRRRDPKTGRILGNLYVLHDEPLTPFE
AMQLDPDYLGLVSQALTHAAKAVQIVGMNTLREIAEDPMLNGRTLPTRLQVLAQRMARHGWAEGSYPQEAVDHDSEEGQD
GLLRNVDRPSSESEAGSKPAPDGSLRNPKEDRTVRMDRINQIRTVPRAKALQHLRLPERLLRLKDEQQSGALVALQQVDE
SLRQAVLDEWDARCRNSAVRNPAGYLFGIIQKAIRGEFKAWAGEGGSSSTPPPPHAPPRPAEPPPPAPNGPGREAARAYL
AKLRSTLGDS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C105 AAN62198.1 conserved hypothetical protein Not tested PAGI-2(C) Protein 4e-110 72
ORF SG100 AAN62321.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 8e-101 70
pph09 CAI36050.1 hypothetical protein Not tested PPHGI-1 Protein 5e-50 47
RL100 AAP84225.1 conserved hypothetical protein Not tested PAPI-1 Protein 2e-45 42