Gene Information

Name : Alide_2715 (Alide_2715)
Accession : YP_004127333.1
Strain : Alicycliphilus denitrificans BC
Genome accession: NC_014910
Putative virulence/resistance : Unknown
Product : single-strand binding protein/primosomal replication protein n
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 2808984 - 2809367 bp
Length : 384 bp
Strand : -
Note : PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: tmz:Tmz1t_0991 single-stranded DNA-binding protein

DNA sequence :
ATGAGCACGCACTTCGTCGGCGAGGGCAACATCGGTTCTGCGCCAGACTACCGCGAATTCCCGAACGGCAACGACGAGCC
GCGCCGGCTGCTGCGCCTGAACGTCTATTTCGACAACCCGATCCCGAAGAAGGATGGCGAGTTCGAGGACCGCGGCGGCT
TCTGGGCGCCGGTGGAACTGTGGCACCGCGACGCCGACCACTGGAAAGACCTGTACCAGAAGGGCATGCGCGTGCTGGTC
GAGGGTCGCACCGTGCGCGATGAATGGGAGGACGCCGACGAGAACGAGCGCGTCACGTTCAAGGTCGAGGCCCGGCGCGT
CGGCATCCTGCCGTACCGCATCGAGTCGGTGACCCTCAGCGCCAAGCCGGCCGGCGGGCAGTAG

Protein sequence :
MSTHFVGEGNIGSAPDYREFPNGNDEPRRLLRLNVYFDNPIPKKDGEFEDRGGFWAPVELWHRDADHWKDLYQKGMRVLV
EGRTVRDEWEDADENERVTFKVEARRVGILPYRIESVTLSAKPAGGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb AAN62318.1 putative single-stranded DNA binding protein Not tested PAGI-3(SG) Protein 3e-50 85
ssb AAN62195.1 putative single-stranded DNA binding protein Not tested PAGI-2(C) Protein 2e-45 75
ssb CAI36053.1 single-stranded DNA-binding protein Not tested PPHGI-1 Protein 6e-33 62
ssb AAP84220.1 single strand DNA binding protein Not tested PAPI-1 Protein 1e-27 59
unnamed ABR13438.1 single-stranded DNA-binding protein 2 Not tested PAGI-5 Protein 1e-28 58