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Name : Alide_2687 (Alide_2687) Accession : YP_004127306.1 Strain : Alicycliphilus denitrificans BC Genome accession: NC_014910 Putative virulence/resistance : Virulence Product : lysine decarboxylase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1982 EC number : 4.1.1.18 Position : 2779573 - 2781933 bp Length : 2361 bp Strand : - Note : KEGG: ajs:Ajs_2762 ornithine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein DNA sequence : ATGAAATTCCGCTTTCCCATCGTCATCATCGACGAGGACTATCGTTCGGAGAACACCTCCGGCCTGGGCATCCGTGCGCT GGCGCAGGCCATCGAGGCCGAGGGCTTCGAGGTGCTGGGCGTGACCAGCTACGGCGACCTGTCGCAGTTCGCCCAGCAGC AAAGCCGGGCCAGCGCCTTCATCCTGTCGATCGACGACGAGGAATTCACGCTGGGCACGGGGCAGGACCCCATCATCCAC AGCCTGCGCAGCTTCATCACGGAAGTGCGGCGCAAGAACGCCGAGGTGCCGATCTACGTGCACGGCGAGACCAAGACCGC GCGCCACCTGCCCAACGACATCCTGCGCGAGCTGCACGGCTTCATCCACATGTTCGAGGACACGCCCGAGTTCGTGGCCA AGCACATCATCCGCGAGGCCAAGAGCTACCTGGAGGGCGTGCAGCCGCCGTTCTTCAAGGCGCTGCTGGACTACGCCGAG GACGGCTCGTACAGCTGGCACTGCCCGGGCCACTCGGGCGGCGTGGCGTTCCTGAAGAGCCCGGTGGGCCAGATGTACCA CCAGTTCTACGGCGAGAACATGCTGCGCGCCGACGTGTGCAACGCCGTGGAGGAACTGGGCCAGCTGCTGGACCACAACG GCGCCATCGGCGAGAGCGAGCGCAACGCCGCGCGCATCTTCAACGCCGACCATTGCTTCTTCGTGACCAACGGCACCAGC ACGTCCAACAAGATGGTCTGGCACCACACGGTGGCGCCGGGCGACGTGGTGGTGGTGGACCGCAACTGCCACAAGTCCAT CCTGCACAGCATCATCATGACCGGGGCCATCCCCGTGTTCCTCAAGCCCACGCGCAACCACTTCGGCATCATCGGCCCGA TTCCTCAAGCTGAGTTCGATCCTGCCACCATCCAGGCCAAGATCCGCGCCAACCCGCTGCTCAAGGGTGTGGACGCCAAG ACCGTCAAGCCGCGCGTGCTGACCCTCACGCAATCGACCTACGACGGCGTGCTCTACAACACCGAGACCATCAAGGGCAT GCTCGACGGGTACGTGGACAACCTGCACTTCGACGAGGCCTGGCTGCCGCACGCGGCCTTCCACCCGTTCTACGGCAGCT TCCACGCCATGGGCAAGAAGCGCGCACGGCCCAGGCATTCGGTGGTCTACGCCACGCAGTCCATCCACAAGCTGCTGGCC GGCATCAGCCAGGCGTCGCACGTGCTGGTGCAGGATTCGCAGACCACCAAGCTCGACCGCCACCTCTTCAACGAGGCCTA CCTGATGCACACCAGCACGAGCCCTCAGTACAGCATCATCGCCAGCTGCGACGTGGCCGCCGCGATGATGGAGCCGCCCG GCGGCACGGCGCTGGTGGAGGAAAGCCTGGTGGAGGCCCTGGACTTCCGCCGAGCCATGCGCCAGGTGGAGGACGAGTTC GGTAAGGACGACTGGTGGTTCAAGGTCTGGGGGCCGGACGCGCTGGTCGAGGAAGGCCTGGGCACGGCCGAGAGCTGGAT CTTCCGCAACAAGGGCAAGAAGAAGAACGGCGCGGCCCGGTGGCACGGCTTCGGCGACCTGGCAGACGGCTTCAACATGC TGGACCCGATCAAGTCGACCATCGTCACGCCCGGCCTGAACCTGGACGGCAAGTTCGACAAGACCGGCATTCCCGCCAGC ATCGTCACCAAGTACCTTGCCGAGCACGGCGTGGTGGTGGAGAAGACGGGCCTGTACAGCTTCTTCATCATGTTCACCAT CGGCATCACCAAGGGCCGCTGGAACACGCTGCTGGCCGCGCTGCAGCAGTTCAAGGACGACTACGAGAAGAACCAGCCCA TGTGGCGCATCCTTCCCGAGTTCTGCCAGCAGCACAAGCGCTACGAGCGCATGGGCCTCAAGGACCTGTGCCAGCACGTG CACCAGCTCTACGCCAAGTACGACATCGCGCGCCTGACGACCGAGATGTACCTCTCGGACCTCACGCCCGCGATGAAGCC CAGCGACGCCTACGCCCACATCGCCCAGCGCAAGACCGAGCGCGTGGCCATCGACCAGCTGGAAGGCCGCATCACCACGA GCCTCATCACGCCGTACCCGCCGGGCATCCCGCTCCTGATCCCGGGCGAGGTGTTCAACAAGAAGATCGTGGACTACCTG AAGTTCGCACGCGAGTTCGCCAAGCTCTGCCCGGGCTTCGAGACCGACATCCACGGCCTGGTGGAGATCGAGGACGACCA CGGCAACGTGAGCTACTACGCCGACTGCGTGGCCGAGACGGGCCGCGCGGCCAACGCCCCCAGGCCCAAGGGCAAGCTGG TCCAGGTGGGGGACGACGGGCCTTTCGGGCGCACGCTCTGA Protein sequence : MKFRFPIVIIDEDYRSENTSGLGIRALAQAIEAEGFEVLGVTSYGDLSQFAQQQSRASAFILSIDDEEFTLGTGQDPIIH SLRSFITEVRRKNAEVPIYVHGETKTARHLPNDILRELHGFIHMFEDTPEFVAKHIIREAKSYLEGVQPPFFKALLDYAE DGSYSWHCPGHSGGVAFLKSPVGQMYHQFYGENMLRADVCNAVEELGQLLDHNGAIGESERNAARIFNADHCFFVTNGTS TSNKMVWHHTVAPGDVVVVDRNCHKSILHSIIMTGAIPVFLKPTRNHFGIIGPIPQAEFDPATIQAKIRANPLLKGVDAK TVKPRVLTLTQSTYDGVLYNTETIKGMLDGYVDNLHFDEAWLPHAAFHPFYGSFHAMGKKRARPRHSVVYATQSIHKLLA GISQASHVLVQDSQTTKLDRHLFNEAYLMHTSTSPQYSIIASCDVAAAMMEPPGGTALVEESLVEALDFRRAMRQVEDEF GKDDWWFKVWGPDALVEEGLGTAESWIFRNKGKKKNGAARWHGFGDLADGFNMLDPIKSTIVTPGLNLDGKFDKTGIPAS IVTKYLAEHGVVVEKTGLYSFFIMFTIGITKGRWNTLLAALQQFKDDYEKNQPMWRILPEFCQQHKRYERMGLKDLCQHV HQLYAKYDIARLTTEMYLSDLTPAMKPSDAYAHIAQRKTERVAIDQLEGRITTSLITPYPPGIPLLIPGEVFNKKIVDYL KFAREFAKLCPGFETDIHGLVEIEDDHGNVSYYADCVAETGRAANAPRPKGKLVQVGDDGPFGRTL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66195.1 | putative cadaverin decarboxylase | Virulence | PAI III 536 | Protein | 2e-104 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Alide_2687 | YP_004127306.1 | lysine decarboxylase | VFG1670 | Protein | 1e-104 | 41 |
