Gene Information

Name : Alide_2677 (Alide_2677)
Accession : YP_004127296.1
Strain : Alicycliphilus denitrificans BC
Genome accession: NC_014910
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : R : General function prediction only
COG ID : COG4172
EC number : -
Position : 2769347 - 2770984 bp
Length : 1638 bp
Strand : -
Note : KEGG: dia:Dtpsy_1915 ABC transporter related; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase

DNA sequence :
ATGCGCGCCACCGCTCCGATGAACCCCCAGACACCGCCGCTGCTGCAGGTGCAGGACCTGCGCGTGCGCTTCGGCGCCAA
GGAAGTGGTGCATGGCGTGAGCTTCGACATCGCCCCCGGCGAAAAGCTCGCGCTGGTGGGCGAGTCGGGATCGGGCAAGA
CGGTGACGGCGCTGGCGCTGCTGCGCCTGGCGGGCGACGCGCAGCTCGAAGGCCGCGCGCTGATGCAGGGGCGCGACCTG
CTGCAGCTACCCGAGCGCGAGCTGCGCGGCGTGCGCGGCGGCGACATCGCCATGGTGTTCCAGGAGCCCATGACGGCGCT
CAACCCGCTCATGCCCGTGGGCGAGCAGGTGGCCGAGGTCTTGATGCTGAAACAGGCCCTGACGCAAGCCCAGAGCGCGC
AAGCAGCTATCGAACTGCTAGCTAGCACGGGCATTCCCGAGCCCGCGCGGCGCGCCGGGAGCTTCCCGCACCAGCTCTCG
GGCGGGCAGCGCCAGCGCGCCATGATCGCCATGGCGCTGGCCAGCCGCCCCCGGCTGCTGCTGGCCGACGAGCCCACCAC
GGCGCTGGACGTGACGCTGCGCGGGCAGATCCTGAACCTGCTGTCCGACCTGCAGCGCCAGACCGGCATGGCCGTGCTGC
TCATCACGCACGACCTGCTGCTGGTGCGCCGCTTCGCCGACCGCGTGGCGGTGATGGAGCAGGGCGCGCTGGTGGAGCAG
GGCACGGTGGCCCAGGTGTTCGGCGCGCCGCGCCACGACTACACGCGCCGCCTGATCGGCAGCACGCCGCGGCGCGACGT
GGCCGAGGGCGCGCCGGCCGAAGGCGCCGTGCCCGCGGCGCAGGCCGGGGCCTTGAGCGTGGCCTATCCCGTGCCCCTGC
CGGGCTTTCGCGGCTGGTTTTCCAAGGGCGAGTTCGTGGCCGTGAAGGGCGTGGGCTTTCGCATCCAGCACGCGCGCACC
CTGGGCGTGGTGGGCGAGTCGGGCTCGGGCAAGTCTACCCTGGCCCAGGCCCTGCTGGGCCTGCTGCCCGCGCGCGGCGA
ACTGCAGGTGGCGGGCCAGTCCTGGCAGCAGCCCGCGCAACACAACAGCACGCACAACCAGCTGCTGCGCCGGCAGGTGC
AGGTGGTGTTCCAGGACCCATTCTCGTCGCTGTCGCCGCGCATGACCGTGGAGGAAATCGTGGGCGAGGGCCTGCACGTG
CATGAACCCCGGCTTCCCGTCCCCGAGCGCCGCTCCCGCGTGGCCGCCATGCTGGCCGAGGTGGGGCTCACCGAGGCGCA
GTTCCCCGGGTTGCTCTCGCGCTATCCGCATGAGTTCTCGGGCGGCCAGCGCCAGCGCCTGGCCATCGCGCGCGCCCTGA
TCCTGCAGCCGCAGCTGCTGGTGCTGGACGAGCCCACGAGCGCGCTGGACGTGACCATCCAGCAGCAGGTGCTGGGCCTG
CTGCAGCGCCTGCAGAAGGAGCGCGCGCTGTCGTACCTGCTCATCACGCACGACGTGGCGGTGGTGCGCGCCATGGCGCA
CGAGGTCCTCGTGATGAAGGACGGCGAGGTGGTGGAAAGCGGCAGCGTGCGGCAGGTGCTGGATGCGCCGCGCCACCCGT
ACACGCAGCGGCTGGTGGAGGCGGCGCGGCCGTTGTGA

Protein sequence :
MRATAPMNPQTPPLLQVQDLRVRFGAKEVVHGVSFDIAPGEKLALVGESGSGKTVTALALLRLAGDAQLEGRALMQGRDL
LQLPERELRGVRGGDIAMVFQEPMTALNPLMPVGEQVAEVLMLKQALTQAQSAQAAIELLASTGIPEPARRAGSFPHQLS
GGQRQRAMIAMALASRPRLLLADEPTTALDVTLRGQILNLLSDLQRQTGMAVLLITHDLLLVRRFADRVAVMEQGALVEQ
GTVAQVFGAPRHDYTRRLIGSTPRRDVAEGAPAEGAVPAAQAGALSVAYPVPLPGFRGWFSKGEFVAVKGVGFRIQHART
LGVVGESGSGKSTLAQALLGLLPARGELQVAGQSWQQPAQHNSTHNQLLRRQVQVVFQDPFSSLSPRMTVEEIVGEGLHV
HEPRLPVPERRSRVAAMLAEVGLTEAQFPGLLSRYPHEFSGGQRQRLAIARALILQPQLLVLDEPTSALDVTIQQQVLGL
LQRLQKERALSYLLITHDVAVVRAMAHEVLVMKDGEVVESGSVRQVLDAPRHPYTQRLVEAARPL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 4e-72 41
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 4e-72 41
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 4e-72 41
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 4e-72 41