Gene Information

Name : Alide_2629 (Alide_2629)
Accession : YP_004127248.1
Strain : Alicycliphilus denitrificans BC
Genome accession: NC_014910
Putative virulence/resistance : Virulence
Product : 3-deoxy-D-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1212
EC number : 2.7.7.38
Position : 2713173 - 2713958 bp
Length : 786 bp
Strand : +
Note : TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; KEGG: ajs:Ajs_2307 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase

DNA sequence :
GTGAGCGCCGCCGCGCCGTTCACGGTGCTGATCCCGGCGCGCCTGGCCTCCACGCGCCTGCCCGACAAGCCGCTGGCCGA
CATCGCCGGCCTGCCCATGGTGGTGCACGTGGCGCGCCGCGCCGCGCAAAGCGGCGCCCGGCGCTGCGTGGTCGCGGCCG
ACGACGCGCGCATCATCGACGCCTGCCTGGCGCACGGCGTGCAGGCCCTGCTGACGCGCGCCGACCACGCGAGCGGCAGC
GACCGCCTGGCCGAGGCCTGCGCGCTGCTCGGCCTTGCGGGCGACGACATCGTGGTCAACGTGCAGGGCGACGAGCCGCT
CATCGACCCGCGTCTCATCGACGCCGTGGCCGCGCTGCTGCACGCGCGCGCCGACGCCAGCATGGGCACGGCCGCCCACG
CCATGGAAAGCGCCGCCGACTTCGCCAACCCCAACGTGGTGAAGGTGGTGCTGGACGCGCAGGGCCTGGCGCACTACTTC
AGCCGCGCCCCCATCCCCCATGCGCGCGACCACGCCGCCGGCAGCGCTTGGTGGCGGCAGGGCCGGGGCGTGCCCGCGGG
CTTCGCGCCGCTGCGCCACATCGGCATCTACAGCTACCGCGCGGGCTTCCTGCGCCGCTTCCCGGAGCTGCCGCCCGCGC
CCACGGAGCAGATCGAGGCGCTGGAGCAGCTGCGCGCGCTGTGGCACGGCCACCGCATTGCCGTGCACGTGGCCGCCAGC
GCCCCCGGCGCGGGCGTGGACACGCCGGAGGACCTGGAACGCGTGCGCGCCCTGCTGGCCGCGTAA

Protein sequence :
MSAAAPFTVLIPARLASTRLPDKPLADIAGLPMVVHVARRAAQSGARRCVVAADDARIIDACLAHGVQALLTRADHASGS
DRLAEACALLGLAGDDIVVNVQGDEPLIDPRLIDAVAALLHARADASMGTAAHAMESAADFANPNVVKVVLDAQGLAHYF
SRAPIPHARDHAAGSAWWRQGRGVPAGFAPLRHIGIYSYRAGFLRRFPELPPAPTEQIEALEQLRALWHGHRIAVHVAAS
APGAGVDTPEDLERVRALLAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 5e-29 43
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 7e-29 43
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 4e-29 43