|
Name : Alide_2375 (Alide_2375) Accession : YP_004126997.1 Strain : Alicycliphilus denitrificans BC Genome accession: NC_014910 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : - Position : 2439645 - 2441627 bp Length : 1983 bp Strand : + Note : KEGG: hse:Hsero_0506 transketolase; TIGRFAM: transketolase; PFAM: Transketolase domain-containing protein; Transketolase central region DNA sequence : ATGAGCGCACATCCGCTGCAGCCCTTGGCGCATGCCATCCGCTTTCTTTCCATCGACGCCATCGTGCGCGCCGCCGAGGG GCACCAGGGCGTGCCGCTGGGCATGGCCGAGATCGCGACCGCCCTCTACACCGGGCACCTGAAGTTCGACCCTGCCGACC CGGCGTGGTGGGACCGCGACCGCGTGGTGCTCTCCAACGGCCACGGCTCGATGCTGCTGTACGCCCTGCTCCACCTGACC GGCTACGAGCAGATCGGGCTCGACCAGATACAGCGCTTTCGCGAGCTGGGCTCGCGCTGCGAGGGCCACCCCGAGCGCAA TCCGGCCCACGGCATCGAGGTGACCACGGGGCCGCTGGGCCAGGGCATCGCCAACGCCTTCGGCATGGCGGTGGCCGAGG CCTACCTGAGCGCCCGCTTCGGCAGCGGCCTGGTGGACCACTTCACCTACGCCTTCGTCGGCGACGGCTGCCTGCAGGAA GGCGTGGGCCAGGAGATGATCTCCCTGGCCGGCCACCTGCGCCTGGGCAAGCTCGTCCTGCTGTGGGACGACAACCGCAT CACCGATGACGGCAGCACGCAGCTGTCCATCAGCGAGGACGTGGCCGCCCGGTTCCGGGTCGCCGGCTGGCATGTCGCCG AGGTGGACGGCCACGACATCGACGCGGTGTCCGCGGCGCTGGCGTTGGCGCGCAAGGACGAACGCCCCTCCTTCATCGCC TGCCGCACCACCATCGCCAAGGGCATTCCGCGCCTGGAAGGCCAGCGCGGCGGGCACAGCGCCCGCCTCTACGAGCAGGA CGCCCAGGAGGCCCGCGCGCTGCTCGGCTGGCCCCACGGCCCGTTCGAGGTACCCGCCCCCGTGCTCGACGCCTGGCGCG CGGCCGGACGGCGCGGCGCCGGGGCGCGTGTCGCATGGCGGCAGCGCCTGGATGCCCTGCCCGATGCCGAGCGCCGGGAG TTCTGCCGCGTCATGAACGGCGAACTGCCCGCGGGCTGGCAGCAGGTGCTGCGGGACTACAAGCAGCGCGCCGTGGCAGC GCCCCAGGAGACCGGCGGCATCCTCATCTCGGCCGAGATCAACGAACTGCTCGCGCCCGTGATCCCCGAGCGCATGGTCG GCTGCGCCGACCTGGAGGCGCCGACGAGCCACAAGCGCAGCCTGGCCGCGTTCACCGCCACGGACCGCTCGGGCGCCTAC GTGCACTGCGGCGTGCGCGAGCATGTCATGGGCGCCATGGCCAACGGCATGGCCGCGCACGGCGGCATCGTGCCGCTGAC CGTGACCTACCTCGCGTTCTCGGACTACGAGCGCCCCGCCATGCGCATGGCCGCGCTCATGGGGCTGCCGGTCAAGTTCG TGTTCAGCCACGACTCCATCGGCATCGGCAAGAACGGCCCCACGCACCAGCCCGTGGAGATCCTGGCCTCGCTGCGCGCC ATGCCCAACATGCTGGTGATGCGCCCCGCCGATGCGGTCGAGGCAGCCGAGTGCTGGGAAGCCGCCATGGCCCACGCCAC CGGCCCCGTGAGCCTGGTCTTCGCGCGGCAGAACCTGCCCCTGGTGCGCACGGCCCATGCGCCCGAAAACCTCAGCGCGC GCGGCGGCTACGTGCTGCGCGAGGCGGCGTGCGGCGCGCGGCAGGTCACGCTGCTGGCCACGGGCTCCGAAGTGGCCCTG GCGCTGGCCGCGCGCGAGGCGCTGGAGCAGGCCGGCATTGCCACGGCCGTCGTCTCCCTGCCCTGCTGGGAACTGTTCGA CCAGCAGGACGCCGCCTACCGCCGCGAGGTACTGGGCAGCGGCGTGCGCGTCGGCGTCGAGGCGGCCTGCCGCCTCGGCT GGGACGCCTACCTGGGAGACAGGGGCGGGTTCGTGGGCATGACGGGCTTCGGCGCCTCGGGCCCGGCGGATGCGCTATAC AAGCTTTTCGACATCACGCCCGAAGCCGTCGCCCGCGAGGCGCGCCGCCTGCTGGCCGCTTGA Protein sequence : MSAHPLQPLAHAIRFLSIDAIVRAAEGHQGVPLGMAEIATALYTGHLKFDPADPAWWDRDRVVLSNGHGSMLLYALLHLT GYEQIGLDQIQRFRELGSRCEGHPERNPAHGIEVTTGPLGQGIANAFGMAVAEAYLSARFGSGLVDHFTYAFVGDGCLQE GVGQEMISLAGHLRLGKLVLLWDDNRITDDGSTQLSISEDVAARFRVAGWHVAEVDGHDIDAVSAALALARKDERPSFIA CRTTIAKGIPRLEGQRGGHSARLYEQDAQEARALLGWPHGPFEVPAPVLDAWRAAGRRGAGARVAWRQRLDALPDAERRE FCRVMNGELPAGWQQVLRDYKQRAVAAPQETGGILISAEINELLAPVIPERMVGCADLEAPTSHKRSLAAFTATDRSGAY VHCGVREHVMGAMANGMAAHGGIVPLTVTYLAFSDYERPAMRMAALMGLPVKFVFSHDSIGIGKNGPTHQPVEILASLRA MPNMLVMRPADAVEAAECWEAAMAHATGPVSLVFARQNLPLVRTAHAPENLSARGGYVLREAACGARQVTLLATGSEVAL ALAAREALEQAGIATAVVSLPCWELFDQQDAAYRREVLGSGVRVGVEAACRLGWDAYLGDRGGFVGMTGFGASGPADALY KLFDITPEAVAREARRLLAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 4e-106 | 45 |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 4e-106 | 45 |
