Gene Information

Name : Alide_0231 (Alide_0231)
Accession : YP_004124902.1
Strain : Alicycliphilus denitrificans BC
Genome accession: NC_014910
Putative virulence/resistance : Resistance
Product : heavy metal translocating p-type atpase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 257160 - 259469 bp
Length : 2310 bp
Strand : -
Note : KEGG: vap:Vapar_3562 heavy metal translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; cadmium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein

DNA sequence :
ATGGACTGCGCCTCGGAGGAGTCGGAAATCCGCCGGGCGCTGGAAGGCATGGCGGGGATTCGCGGCCTGCGATTCAACCT
AGGGGATCGAGAGCTTGCCATTGCCGCCGATGACCACGCGCTGCCCCAAGCCCTGGAAGCGATCCGCAAAGCGGGTTTCA
AGCCAGAACCCCTCGGCGCGAAGAATGCCCAGCGCTTCCGCATTGCAAACATGGACTGTGCCTCGGAGGAGTCGGAAATC
CGCCGGGCGTTGGACGGCATGGCGGGAATTCGTAGCCTGCAATTCAATCTGGGCGACCGCGAGCTGGCCATTGCCGCCGA
TGATCCTGTCTTGCAGCAGGCGGTGGACGCGATCCGCAAGGCAGGCTTCAAGCCGGAACCTCTTGGCGATACCGGGTCGT
CGGCTGCTGCCGCTGCGGTTGCCTCGCCAACGGGCTTCTGGACGACCTGGGGCAAGTCGCTGGGCGCCTTGGGGCTCGCC
GTGGCGGCCGAAGGCTTGGCATTCGCCTTCCCAGACAGCGTGCCAGTCAAGGCGCTGGGAATGGCACTGGCTGCGGCGGC
CATCGCGCTGTCGGGTTTCTCGGTTTACGGCAAGGGACTGGCCGCGCTGCGACAGGGCCGCTTGAACATCAATGCCCTGA
TGACCGTGGCCGTGACCGGCGCTTTTCTGATCGGCCAGTGGCCCGAAGCGGCGATGGTGATGGCCTTGTATGCCATTGCG
GAAGCCATCGAGGCGCGCGCCGTGGATCGGGCGCGCGGTGCCATCAAGAGCTTGCTGGCGCTCGCGCCGGAGCAGGCCGA
AGTGCGTCAAGACGACGGCAGTTGGGCACGCATCGGCGTCAAGGAAGTCACTGTGGGCGCGACGGTGCGTATTCGCCCCG
GCGAGCGCCTTCCTCTGGATGGCATCGTGACCTTGGGCCAGAGCGCCATTGACCAATCCCCCGTGACCGGCGAAAGCCTG
CCGGTGGACAAGAGCCCTGGCGATGAAGTCTTCGCCGGCACCATCAATCAGGCTGCGGCGCTGGAAATCCGTGTTACGGC
GCCTGCTTCCGACAGCACGCTGGCGCGCATCATCCACGCCGTTGAGCAGGCCCAGTCCTCCCGCGCCCCCACCCAGCGTT
TCGTGGATCGCTTTGCCGCCATCTACACGCCTGCGGTGTTTGTCCTGGCCGTTGCCGTTGCGCTGTTGGCTCCGTGGCTC
ATGGGGCTGACCTGGATGCAGGCCGCCTATAAGGCTCTGGTGCTGCTGGTCATTGCCTGCCCCTGCGCCTTGGTGATTTC
CACGCCCGTCACCGTCGTCAGCGGTTTGGCCGCCGGGGCGCGGCGGGGCATCCTGATCAAAGGCGGTGTGTACCTGGAAG
AGGCGCGCAAGATCAAGGCCGTGGCGCTGGACAAGACCGGCACCATCACCGAAGGCAAGCCCAAGCTGGTGGCCTTCGAG
CCCGTGGACGCAGGACTCGGTCAGCAAGTCCTGGAGGGGCTGGCCAAGAGCCTCGCGGCGCGGTCGGATCACCCGGTGTC
CAAAGCCATCGCGGACGGCGTGTCATCCGCCGCGCAAGAGGTGGACGAATTTCAGGCCGTTGCCGGGCGCGGCGTGCAGG
GGGTGATCGACGGCCATACCTATGTGCTGGCCAACCACCGCTGGATCGAAGAGCGCGGGCAATGCTCGGCTGAACTCGAA
GCCCGCCTCGCAGTGCATGAACAAGCGGGCCGTACCGTCACGCTGCTGGCCAGCAGCGAACGGGTCATGGCCATCTGCGC
GGTGGCTGACACGATCAAACCCTCGTCGGCGCAGGCCGTGGCCGACCTGAAGGCGCTGGGTGTGACGCCGGTGATGCTGA
CGGGGGACAACCTAGCGACGGCGCAAACCGTCGGCGCCCAGGCGGGCATCGCCGAGGTGCGCGGCAACCTGCTGCCCGAA
GACAAGCTGCGCGCCATCGGCGAGCTTCAGCAGCGCCTGGGCGTCACGGCGATGACCGGCGACGGCATCAACGATGCCCC
CGCGCTGGCGAAGGCTGACATCGGCTTCGCTATGGGCGGCGCGGGCACCCACACGGCGATGGAAGCCGCCGACGTGGTGG
TCATGAACGACGACCTGCGCCGCCTGCCCGAAACGATCCGGCTATCCAAGCGCACCCACGCCGTGCTGTGGCAGAACATC
GCGCTCGCGCTGGGCATCAAGTTGGTGTTCTTGCTGCTGGCCATCTTCGACGATGCCTCCATGTGGATGGCCGTGTTCGC
CGACATGGGGGCGAGCCTGCTGGTGGTCTTCAACGGGCTGAGGCTGCTCAGGCAGCGGGCGGGTCAGTAA

Protein sequence :
MDCASEESEIRRALEGMAGIRGLRFNLGDRELAIAADDHALPQALEAIRKAGFKPEPLGAKNAQRFRIANMDCASEESEI
RRALDGMAGIRSLQFNLGDRELAIAADDPVLQQAVDAIRKAGFKPEPLGDTGSSAAAAAVASPTGFWTTWGKSLGALGLA
VAAEGLAFAFPDSVPVKALGMALAAAAIALSGFSVYGKGLAALRQGRLNINALMTVAVTGAFLIGQWPEAAMVMALYAIA
EAIEARAVDRARGAIKSLLALAPEQAEVRQDDGSWARIGVKEVTVGATVRIRPGERLPLDGIVTLGQSAIDQSPVTGESL
PVDKSPGDEVFAGTINQAAALEIRVTAPASDSTLARIIHAVEQAQSSRAPTQRFVDRFAAIYTPAVFVLAVAVALLAPWL
MGLTWMQAAYKALVLLVIACPCALVISTPVTVVSGLAAGARRGILIKGGVYLEEARKIKAVALDKTGTITEGKPKLVAFE
PVDAGLGQQVLEGLAKSLAARSDHPVSKAIADGVSSAAQEVDEFQAVAGRGVQGVIDGHTYVLANHRWIEERGQCSAELE
ARLAVHEQAGRTVTLLASSERVMAICAVADTIKPSSAQAVADLKALGVTPVMLTGDNLATAQTVGAQAGIAEVRGNLLPE
DKLRAIGELQQRLGVTAMTGDGINDAPALAKADIGFAMGGAGTHTAMEAADVVVMNDDLRRLPETIRLSKRTHAVLWQNI
ALALGIKLVFLLLAIFDDASMWMAVFADMGASLLVVFNGLRLLRQRAGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0075 NP_763630.1 cadmium resistance protein B Not tested SCCpbp4 Protein 3e-117 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Alide_0231 YP_004124902.1 heavy metal translocating p-type atpase BAC0298 Protein 1e-155 63