Gene Information

Name : Alide_0221 (Alide_0221)
Accession : YP_004124892.1
Strain : Alicycliphilus denitrificans BC
Genome accession: NC_014910
Putative virulence/resistance : Unknown
Product : LysR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0583
EC number : -
Position : 245815 - 246708 bp
Length : 894 bp
Strand : -
Note : PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sml:Smlt1302 LysR family transcriptional regulator

DNA sequence : 
ATGGAATTGCGTCACCTCCGGTACTTTCTGGCCGTTGCCGAAGAGCTTCACTTCGCCCGCGCTGCGGAGCGGCTGCATAT
CGAACAGTCACCACTGTCGCGCGCCATCAGGGAATTGGAAGAGGAATTGGGCGCGCAACTGTTCGTGCGTACCAGCCGCA
GCACGCGCCTGACGCTGGCGGGCAAGCTGCTGATGGAGAACGCGCCTCGCGTGCTGCTGGCGCTGGACCAGGCGCGTGAG
AGCGTGAAGGCGGCAGCCAATGGCTTTCACGGCCGGTTGCGCGTGGCGCTGTCCGACGGCATCACCCCCTCGCGCCTGCC
GGCGCTGCTGGCGCGCTGCCGCGAGGAAGACCCGGAGATCGAGATCCGCCTGTTCGAGGTGCCGCTGGCCCAGCAACTCA
GCGGCCTGCGTGACGATCTATACGACGCGGGCTTCTCGATGGCCGACGAGGTGGGCGACGGCATCATCATCGAACCCGCC
TGGGAGGATGAGCTGATGGTCGCCATGCCCGCGCGCCATGAACTACTGGCCCACAGGCGGGTACCGCTGGATGAAGTGCT
GCAACATCCCCTGGTGCTGGGCGACCCGGCAGTTTGCGAAGGCCATGCCAAGCAGATCGACCGCATCCTGCGCAAGCAGG
ACCGGGAGCCCTTGATCGAACAGTACGTCGCCACGTTCGACGTGATGATGACTTTCGTGTCGGCCGGCTTGGCGCTGGGG
CTCGCAGGCGCCGCGCACATCGCTTCCAGCCGCGAGCCGGGCGTGGTGGGCCGACCGCTCGCGGGAAAGTCGCCCATGCT
CACTACCTATCTGCTGCGCCGCGACGCCGAGCCGTCGCAGGCGCTAGCCCGCTTTATCGAGCGGGTCGAAGCCCTGGGAC
CGGGAGACGCTTAG

Protein sequence : 
MELRHLRYFLAVAEELHFARAAERLHIEQSPLSRAIRELEEELGAQLFVRTSRSTRLTLAGKLLMENAPRVLLALDQARE
SVKAAANGFHGRLRVALSDGITPSRLPALLARCREEDPEIEIRLFEVPLAQQLSGLRDDLYDAGFSMADEVGDGIIIEPA
WEDELMVAMPARHELLAHRRVPLDEVLQHPLVLGDPAVCEGHAKQIDRILRKQDREPLIEQYVATFDVMMTFVSAGLALG
LAGAAHIASSREPGVVGRPLAGKSPMLTTYLLRRDAEPSQALARFIERVEALGPGDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
bphR AAN62138.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 4e-70 54
bphR AAN62326.1 putative transcriptional regulator Not tested PAGI-3(SG) Protein 2e-51 41