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Name : Alide_1861 (Alide_1861) Accession : YP_004126495.1 Strain : Alicycliphilus denitrificans BC Genome accession: NC_014910 Putative virulence/resistance : Unknown Product : DNA-directed DNA polymerase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0389 EC number : 2.7.7.7 Position : 1919375 - 1920661 bp Length : 1287 bp Strand : + Note : KEGG: tin:Tint_2912 DNA-directed DNA polymerase; PFAM: UMUC domain protein DNA-repair protein DNA sequence : ATGTTTGCGCTGATCGACGGCAACAACTTTTATGCGAGCTGCGAGCGGGTTTTCCAGCCCGAGCTGCGCGGGCGGCCCCT TGTCGTGCTATCCAACAACGACGGCTGTGCCATCGCCCGCAGTGACGAAGCCAAGGCCCTGGGCGTGAAGATGGGCCAGG CCATCCACCAGGTGGCGCCAGACGTGCGCAAGCAACTGGCCGTCCGGTCGGCCAATTTTGCGCTGTACGGCGACATGAGC GCGCGGGTGCTGGCCATCCTGCGCGACGCGGCGCCGCGTGTGGAGCCGTACAGCATCGACGAGTCGTTTCTCGACCTGAC CGGCATGCGGGATCGTGAAGCGTTTGCCCGCGAGCTGCACGAGCGCGTGCATCGCTGGACGGGTATCCCCAACTGCGTTG GCATCGGCGCGACCAAGACGCTGGCCAAGCTCGGCAATTTCGTGGCCAAGAGCTCAGTCCGCAAACCTGGCAGTTATCCG GCGTCGCTCAGCGGCGTGGCCGATCTGGCGGCGCTGTCGCCGCAGGCCCTGGCCGAGGTGCTCACCGCCACGCCCGTGGG CGAACTGTGGGGCGTTGGGCCGCGCTGGTCGGCACGGCTGCGTGAACTGGGCATAGCGACGGCGCTGCAACTGCGTGATG CGCAGCGCGACCTGATTCTAGAGAGGTTCGGCGTGGTGCTCTCGCGCACCCAGCGTGAGCTGTCGGGCGATCCTTGCCTT GCGTTGGAGGAAGTAGAACCCGACCGCCAACAAATCATGGTCAGTCGATCCTTCGGCGAGCGCGTCGAGAATCACCAGTC CATCAGCGAGGCCTTCGCCACATTCGCCGTGCGCGCCTGCGAGAAGTTGCGCGCTCGTGGCCTCGTGACCGGCGCTATCG GCATCTTCGCCAACACCGACCACTTCCGCCTCGAGCTGCGCCAGCACCATCCGCAACGCACGACCGATCTACCGCGCGCC ACCAGCGATACCCGCGTAGTGCTCGACACCCTGCGTCGGATGCAGCGGGGCTTCCTCAAGGACGGATTCGCGTACAAGAA GGCCGGTGTGTGGTTGATGGATTTGGGCCGCCCCGAACAGATTCAGCCTGATCTCTTCGCGCCGAGCACCATCGGCAACG ACAAGCTGATGTCCGCGATGGACGCGATCAACCGACGCTACGGGCGCGGCACCGTGGGCTTGGGTGCAACCGGCTGGCGG GAACGTCCACAGTGGGGTATGCGGCAGGCAAACCTCTCGCTGCACTTCACCACGTCATTGCGCGACCTGCCGCGCGCGCA TTGTTAA Protein sequence : MFALIDGNNFYASCERVFQPELRGRPLVVLSNNDGCAIARSDEAKALGVKMGQAIHQVAPDVRKQLAVRSANFALYGDMS ARVLAILRDAAPRVEPYSIDESFLDLTGMRDREAFARELHERVHRWTGIPNCVGIGATKTLAKLGNFVAKSSVRKPGSYP ASLSGVADLAALSPQALAEVLTATPVGELWGVGPRWSARLRELGIATALQLRDAQRDLILERFGVVLSRTQRELSGDPCL ALEEVEPDRQQIMVSRSFGERVENHQSISEAFATFAVRACEKLRARGLVTGAIGIFANTDHFRLELRQHHPQRTTDLPRA TSDTRVVLDTLRRMQRGFLKDGFAYKKAGVWLMDLGRPEQIQPDLFAPSTIGNDKLMSAMDAINRRYGRGTVGLGATGWR ERPQWGMRQANLSLHFTTSLRDLPRAHC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rulB | CAI36137.1 | nucleotidyltransferase/DNA polymerase | Not tested | PPHGI-1 | Protein | 2e-67 | 43 |
| umuC | NP_807889.1 | DNA polymerase V subunit UmuC | Not tested | SPI-7 | Protein | 6e-65 | 42 |
| samB | NP_458681.1 | UV protection protein | Not tested | SPI-7 | Protein | 6e-65 | 42 |
| unnamed | ABR13403.1 | DNA-directed DNA polymerase | Not tested | PAGI-5 | Protein | 9e-49 | 42 |
