Gene Information

Name : Alide_1715 (Alide_1715)
Accession : YP_004126356.1
Strain : Alicycliphilus denitrificans BC
Genome accession: NC_014910
Putative virulence/resistance : Unknown
Product : transposase is4 family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3039
EC number : -
Position : 1774166 - 1775152 bp
Length : 987 bp
Strand : +
Note : PFAM: transposase IS4 family protein; KEGG: ajs:Ajs_3395 transposase, IS4 family protein

DNA sequence :
ATGAAGCAAAGCAGCCTGGGCCTGAGCAATACCACCAAGCGCACGCGTAAGCGCGAATTCCTAGACGCCATGGAACTGGT
GGTCCCTTGGGCTGAGCTGGTCTCGCTGATAGAGCCCTACGCACCCGAGAGTGGGCGCCGGGGCCAGCAGCCCTTTGCAG
TACAAACCCTGCTTCGCATCCATTTCATGCAGCAGTGGTTCAAACTCAGTGACCCCGCCATGGAAGAAGCCTTGCACGAC
GTGCCAGCCTTTCGGGACTTTGCGGGCCTATCGCACTGGGACGAGCACATCCCCAGTGAATCGAGCATCCTGCGCTTTAG
GCATCTGCTGGAGCGCCACAAGCTGGCCGATCAGATCCTGGCCACCGTGAATGCGCTACTGCAAGCCAAGGGGTTGCAAC
TCAAGGCAGGCACCGTAGTGGATGCCACGCTGATTGCTGCGCCCAGTTCAACCAAAAACCAAAGCCACGAGCGTGACCCC
GAGATGCATCAAAGCAAGAAGGGCAACCAGTGGTACTTCGGTATGAAGGCCCACATTGGGGTGGATGCAGACTCGGGCCT
GGTGCATACGGTGCGAGGCACCAGCGGCAATGTCGGTGATGTGGTCGAGGCCAACAGCCTATTGCACGGGCAGGAGACAG
ACGCCTTTGGTGATGCGGGTTACCAGGGGGTGGACAAGCGCGCTGATGCCAAGCCAACGGTGCGCTGGCATGTGGCCATG
CGCCCAGGGCTGCGCCGGGCGTTGGACAAAGACAGGCCTCTGGAGGCGCTGATTGACCAGTTGGAGCGCACCAAGGCCAG
CATCCGGGCCAAGGTGGAGCACCCGTTCAGAGTGCTCAAGCAACAGTTTGGGTATGTAAAGGTGCGCTATCGAGGGCTCA
AGAAGAACACGGCGCAGATCGTCACGCTGTTTGCGCTGTCAAACCTGTGGATGGCAAGGCACAAGCTGCTGCAATGCATG
GGACAGGTGCGCGCGCACAGGGCATGA

Protein sequence :
MKQSSLGLSNTTKRTRKREFLDAMELVVPWAELVSLIEPYAPESGRRGQQPFAVQTLLRIHFMQQWFKLSDPAMEEALHD
VPAFRDFAGLSHWDEHIPSESSILRFRHLLERHKLADQILATVNALLQAKGLQLKAGTVVDATLIAAPSSTKNQSHERDP
EMHQSKKGNQWYFGMKAHIGVDADSGLVHTVRGTSGNVGDVVEANSLLHGQETDAFGDAGYQGVDKRADAKPTVRWHVAM
RPGLRRALDKDRPLEALIDQLERTKASIRAKVEHPFRVLKQQFGYVKVRYRGLKKNTAQIVTLFALSNLWMARHKLLQCM
GQVRAHRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA AAF71487.1 TnpA Not tested Hrp PAI Protein 3e-66 57
PSPTO_1407 YP_003355052.1 ISPssy transposase or derivative Not tested Hrp PAI Protein 5e-66 57
tnp-33 AAN62255.1 transposase Not tested PAGI-3(SG) Protein 3e-79 56
unnamed AAO33449.1 putative transposase Not tested Not named Protein 3e-52 52
tnpA ACF06175.1 putative transposase Not tested Tn5036-like Protein 2e-63 49
tnpA ACF06178.1 putative transposase Not tested Tn5036-like Protein 2e-63 49