Gene Information

Name : Alide_1354 (Alide_1354)
Accession : YP_004126003.1
Strain : Alicycliphilus denitrificans BC
Genome accession: NC_014910
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1431970 - 1432641 bp
Length : 672 bp
Strand : -
Note : KEGG: dia:Dtpsy_2458 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGAGCCCCATGGACGAGCTGCTGCGTGTGCAGGCCCTGGCCAAACGCTACGGCGCGGCCACCGTGTTCGAGAACGTGGA
GTTCACGCTGCGCGCAGGGGAGTTCCTCGCCATCGTGGGCGAGTCGGGCGTGGGCAAGTCCACGCTGCTCAACTGCCTGG
CGGGGCTGGACGGCTGGGACGCGGGCCGCATCGTGCACGCCGGCGGCACCGACCTCGCCGCGCTCGACGACGCGCAGCGC
GCCCTGTGGCGCCGCGCCCACGTGGGCTTCGTGTTCCAGGCGTTCCACGTGCTGCCGCACCTGGACGTGGCGCAGAACGT
GGGCCTACCGCTGCTGCTGCTGGGCCGCCCCGACGGAGCGCGCGTGCAGCAGATGCTGGCCGCCGTGGGCCTGGAAGGCC
TGGGCGGGCGGCTGCCGCAGCAGCTCAGCGGCGGCCAGATGCAGCGCGTAGCCATCGCGCGGGCCCTGGTGCACCGCCCC
GCTCTGCTGCTGGCCGACGAGCCCACGGGCAACCTGGACCCCGGCACGGCGGCGCGGATCATGGATCTGCTCATCGCCCA
GACCCGCGGGCATGGCGCCGCGCTCGTGCTCGTCACCCACTCGCAGGCCGCGGCGGACCGGGCGGACCGGGTGCTGCGCC
TGACGGCGCAGGGTATCCGCCCGGCGGCATGA

Protein sequence : 
MSPMDELLRVQALAKRYGAATVFENVEFTLRAGEFLAIVGESGVGKSTLLNCLAGLDGWDAGRIVHAGGTDLAALDDAQR
ALWRRAHVGFVFQAFHVLPHLDVAQNVGLPLLLLGRPDGARVQQMLAAVGLEGLGGRLPQQLSGGQMQRVAIARALVHRP
ALLLADEPTGNLDPGTAARIMDLLIAQTRGHGAALVLVTHSQAAADRADRVLRLTAQGIRPAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-27 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-27 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-27 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-27 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Alide_1354 YP_004126003.1 ABC transporter NC_008702.1.4606598. Protein 7e-20 48
Alide_1354 YP_004126003.1 ABC transporter CP001581.1.gene798.p Protein 6e-29 42
Alide_1354 YP_004126003.1 ABC transporter NC_012469.1.7686878. Protein 5e-25 41