Gene Information

Name : Alide_1282 (Alide_1282)
Accession : YP_004125931.1
Strain : Alicycliphilus denitrificans BC
Genome accession: NC_014910
Putative virulence/resistance : Unknown
Product : phage major capsid protein, p2 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1348065 - 1349069 bp
Length : 1005 bp
Strand : -
Note : KEGG: csa:Csal_1397 phage major capsid protein, P2; TIGRFAM: phage major capsid protein, P2 family; PFAM: major capsid protein P2

DNA sequence :
ATGAAAAACGCTACCCGCCTGCTGTTCAACCAATACCTGTCCGACCAGGCCGCGCTCAACGGCGTGCCATCCGTGGCGCA
GAAGTTCGCCGTGGCCCCCACCATCCAGCAGAAGCTGGAAAGCCGCATTCAGGAAAGCAGCGCCTTCCTGCAGTCCATCA
ACATCGTGCCGGTGGATGAGATGCAGGGAGAAAAGCTGGGCCTGGGCGCATCCGGTCCCATCGCGAGCCGCACCAACACC
AACCAGAAAGACCGCTCCACCAAGGATGTGTCGTCGCTGGAAGGCCAGGGCTACAAGTGCGAGAAGACCGACTACGACAC
CCACATCGGTTACAACAAACTGGATATGTGGGCGAAGTTCCCTGACTTCCAACTGCGGCTGGCCCGTGCCATCCAGCGCC
AGTGCGCGCTGGACCGCATCATGATTGGCTTCAACGGCACCAGCGTGGCCGTTGAATCCGACCTCAACAACAACCCGCTG
CTGCAGGACGTGAACAAGGGCTGGCTGCAGTACCTGCGCGACAACGCCGCCGCCCGCGTCATGGACGAAGGCGCCACGCA
AGGCAAGGTGGTGGTGGGCGCAGCCGGCGATTACAAGACGCTGGACGGCCTGGTGTACGACGCCAGCCAGTCGCTGCTGG
ACGCATGGCACGCCAATGCCGGCGACCTGGTGGCCATCGTGGGCCGCGACCTCATGCATGACAAGCTGTTCCCGCTGGTC
AACGAAAAGCAGGCGCCCACCGAGACACTGGCCGCCGACATCGTGCGCAGCCAGATGCGACTGGGCACGCTGCAGGCCAT
CACGGTGCCGTTCATGAAGCCCAACGCCGTGCTCATCACCAGCCTGGACAACCTGTCCATCTACTACCAGGCAGGCGCCC
GCCGCCGTACCGTGATGGACAACCCGAAGCGCGACCGCATCGAGACCTACGAAAGCTCCAACGACGCATTCGTGGTCGAA
GACCTGGGCAAGGCCTGCCTGGTCGAAAACATCGAGATGGCCTGA

Protein sequence :
MKNATRLLFNQYLSDQAALNGVPSVAQKFAVAPTIQQKLESRIQESSAFLQSINIVPVDEMQGEKLGLGASGPIASRTNT
NQKDRSTKDVSSLEGQGYKCEKTDYDTHIGYNKLDMWAKFPDFQLRLARAIQRQCALDRIMIGFNGTSVAVESDLNNNPL
LQDVNKGWLQYLRDNAAARVMDEGATQGKVVVGAAGDYKTLDGLVYDASQSLLDAWHANAGDLVAIVGRDLMHDKLFPLV
NEKQAPTETLAADIVRSQMRLGTLQAITVPFMKPNAVLITSLDNLSIYYQAGARRRTVMDNPKRDRIETYESSNDAFVVE
DLGKACLVENIEMA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13466.1 predicted major capsid protein Not tested PAGI-6 Protein 4e-88 56
STY4625 NP_458707.1 putative major capsid protein Not tested SPI-7 Protein 2e-78 52
t4319 NP_807914.1 major capsid protein Not tested SPI-7 Protein 2e-78 52