Gene Information

Name : dnaB (BVAF_026)
Accession : YP_004124114.1
Strain : Candidatus Blochmannia vafer BVAF
Genome accession: NC_014909
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : -
Position : 31176 - 32552 bp
Length : 1377 bp
Strand : +
Note : -

DNA sequence :
ATGTGTATGTCTAATCGAAATAAGCATGTTAGTGATGTTAAAATTTTGCCATATTCATTAGAAGCTGAGCAATCAGTTTT
AGGTAGTTTGATGTTAGATAATGAACAATGGGAGTATATATCAACACAAATCACTTCTAATGATTTTTATAATCCAGCCC
ATCGAATAATTTTTTCTGAAATTCAACGTTTGTTAGAAATCAATAAACCTATTGATTTAATAACATTATCTGAATCTTTA
GAAATACGAGGAAAATTAGAATTAGTAGGAGGATTTGGATATTTAGCTGAATTGTCGAAAAATGTACCTAGTGTATCTAA
TATACATGAGTATGCGCATATAATTAAAGAACGTTCAATAACTCGATCAGTTATCACTACTGCTCATAGAATAGCTGATG
CTGGATATAATACTAAAGGTAGAAATAGTGACGAATTATTAGATTTTGTTGAGTCTCTTGTTTTTGAAATTGCACATCAT
AAACATCATGATAATAAACATTTGAAAAGTATAGATTATATTTTATCAGATGCTGTTTCTTATATTGAAAAATCATGTAG
AAATGCTAGGTTTGGTATTACTGGTATTTCTAGTGGATATAGAGATTTAGATAAAAAAACTGATGGATTACATCAGTCTG
ATTTAATTGTTATTGCAGCTCGTCCTTCTATGGGAAAAACTGCGTTTGCTATGAATTTGTGTGAGCATGTAGCAATGAAT
GAGATAAAACCAGTGTTAATATTTAGTTTAGAAATGCCTGGAGATCAAATAGTAATGAGAATGTTATCTTCTTTATCTAG
AGTAGATTATATGAATATAAGAACGGGGAAGTTAAATCATGAAGATCGGATAAGGATTGTTAGTACAATAGAATTATTAT
TAGAAAAACGCAATATATATATTGATGATTCTTCATATTTAACTCCTTCTGATGTGAGAAGTCGATCTCGAAGATTATTT
AAAGAGCATGATGGGTTAAGTCTGATTATGATTGATTATTTACAATTAATGAGAGTGCCATCTTTATCTAATAATCGTAC
ATTGGAGATTTCTGAGGTTTCTCGATCATTAAAATCTTTAGCTAAAGAATTAAAAGTACCGGTTATTGCTATTTCTCAAT
TAAATAGAAGTTTAGAACAGCGAGTAGATAAACATCCTATTAATTCGGATTTAAGAGAATCTGGAGCTATTGAGCAAGAT
GCAGATCTTATTTTATTTATTTATAGAGATGAATTGTATCATGAGAATAGTGACATGAAAGGTATTGCGGAGATTATTCT
TGGTAAACAAAGAAATGGGCCGGTAGGTACAATAAGATTGATTTTTAATGGACAATGGGCTCGATTTGATAATTATATTG
ATAATAATCAGTATTGA

Protein sequence :
MCMSNRNKHVSDVKILPYSLEAEQSVLGSLMLDNEQWEYISTQITSNDFYNPAHRIIFSEIQRLLEINKPIDLITLSESL
EIRGKLELVGGFGYLAELSKNVPSVSNIHEYAHIIKERSITRSVITTAHRIADAGYNTKGRNSDELLDFVESLVFEIAHH
KHHDNKHLKSIDYILSDAVSYIEKSCRNARFGITGISSGYRDLDKKTDGLHQSDLIVIAARPSMGKTAFAMNLCEHVAMN
EIKPVLIFSLEMPGDQIVMRMLSSLSRVDYMNIRTGKLNHEDRIRIVSTIELLLEKRNIYIDDSSYLTPSDVRSRSRRLF
KEHDGLSLIMIDYLQLMRVPSLSNNRTLEISEVSRSLKSLAKELKVPVIAISQLNRSLEQRVDKHPINSDLRESGAIEQD
ADLILFIYRDELYHENSDMKGIAEIILGKQRNGPVGTIRLIFNGQWARFDNYIDNNQY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 8e-85 48
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 2e-86 46
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 2e-86 46
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 3e-89 46
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 8e-89 46
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 7e-90 46
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 2e-74 43
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 5e-86 43
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 1e-67 43