Gene Information

Name : Alide_4620 (Alide_4620)
Accession : YP_004124065.1
Strain :
Genome accession: NC_014908
Putative virulence/resistance : Unknown
Product : IstB domain protein ATP-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 90406 - 91161 bp
Length : 756 bp
Strand : -
Note : KEGG: bge:BC1002_7025 IstB domain protein ATP-binding protein; PFAM: IstB domain protein ATP-binding protein; IstB ATP binding domain protein; SMART: AAA ATPase

DNA sequence : 
ATGCTCAATCATCCAACACACGACCAACTCCAGCAATTACGCCTGTTCGGAATGGCACGCGCCCTCGCCGAACAGCAGGC
CATTCCCGACATTACGCATCTGGCATTCGAGGAACGCCTCGGCCTCTTGGTTGAGCGCGAAGTCACTGAGCGTGATTCCC
GACTAACTTCCGGCCGGCTACGGCGTGCAAAGCTCAAACAGGCAGCCGTTGCCGAGGACGTGGACTACCGCGCAGCACGA
AGCCTGGACCGCACCTTATTCAACCGGCTATTGACCGGCTCGTGGGTAGCAGAACACCAGAATGTGCTGATCACAGGCCC
CACGGGCGTCGGCAAGACTTGGCTGGCCTGCGCTCTGGCCAACCAAGCGTGCCGTCAGGGCAAATCGGTGCTTTACCTGC
GGGTGCCGCGATTGTTCGAGGATGTGGCGATTGCTCATGGGGACGGGCGTTACGGCAAGCTGATGATGCAACTCGCCAAG
ACCGATGTGCTGCTATTGGACGACTGGGGATTGGCGTTACTGACCGACTCCGCGCGACGTGACTTGCTGGAAATCTTTGA
CGACCGGCACGGCCACCGTTCAACCATCGTAACCAGTCAATTGCCGGTGGCGAACTGGCATGAATCCATCGGCGACCCCA
CCTTGGCTGACGCCATTCTGGATCGCCTGGTTCACAACGCTCATCAATTAATTCTGACCGGAGAATCCATGAGAAAACAC
AAAAATAGTTTGACCCAAAAACAAGTTTCAGAGTAA

Protein sequence : 
MLNHPTHDQLQQLRLFGMARALAEQQAIPDITHLAFEERLGLLVEREVTERDSRLTSGRLRRAKLKQAAVAEDVDYRAAR
SLDRTLFNRLLTGSWVAEHQNVLITGPTGVGKTWLACALANQACRQGKSVLYLRVPRLFEDVAIAHGDGRYGKLMMQLAK
TDVLLLDDWGLALLTDSARRDLLEIFDDRHGHRSTIVTSQLPVANWHESIGDPTLADAILDRLVHNAHQLILTGESMRKH
KNSLTQKQVSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAC39295.1 hypothetical protein Not tested LPA Protein 6e-36 49
ORF_5 AAZ04416.1 putative transposase subunit Not tested PAI I APEC-O1 Protein 6e-36 49
APECO1_3529 YP_854246.1 ISEc12 ATP-binding protein Not tested PAI I APEC-O1 Protein 6e-36 49
VPI2_0004c ACA01821.1 IstB protein Not tested VPI-2 Protein 1e-35 48