Gene Information

Name : Daes_0567 (Daes_0567)
Accession : YP_004120332.1
Strain : Desulfovibrio aespoeensis Aspo-2
Genome accession: NC_014844
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1132
EC number : -
Position : 605141 - 606931 bp
Length : 1791 bp
Strand : +
Note : KEGG: wsu:WS1265 ABC transporter ATP-binding/permease protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase

DNA sequence : 
ATGACTATAAGAACTGACGCGGTGCCGCCGTTGGCCGAAACGTGGAAAAGGATGCAACTGGCCAGCGGGGACCAGGTGGG
GGCGCTGCGGACGTGCATGCTCTTCTCCATCCTGTCCGCCGTGGCCCAGGGGCTGGGCTTCGCCTGCTTCTATCCGCTGC
TGGGGAATCTTCTGGCCACGCCCTCGGACTGGGACACGGTCTGCCTTTGGGCGGGCGCGCTGGCCGTGTGCGCCGTGCTC
GACACGGCCTTTGTCTGGATGTCCCGCCGTTTCGACTACACCGGCTGCATTGCCGAAGTGACCCACCAACTGCGGATCAG
GCTGGGCGAGCAGCTTCGCCGGATGCCCCTGGAGAATCTCTACGACAGGCGCACAGGGGAGCTCTCCGCCGTGCTGACCG
GCAACGTTGACGAGGTGGTCACGCCCATGGGGATTCTCTCCTCGGCCTTCCTGACCATCCTTATCACCCCGGCGGTGTCG
GTGGCGGCCACGGCGCTGGTGGACTGGCGGCTGGCCCTGGCCATGGCCGCGGTCTTCCCGCTGGCCCTGCCGCTCTATTA
TTGGCGGCGTCGCAGCTCGGGCCGGTCCATGCGCACCCTTGCGGCGGCCCACGCCAGAACCAACTCCGAGATGATCGAAT
ATGTCCAGGGGCTGCCTGTGCTCAGGGCCACCAACCAGGTGGGCGGGCGGTTCGAGCGGCTGCGGGCCGCCCTGGCGCAT
CTGCAAGAGGTCCAGAAAGAGGCGCAGCTGCGGGCCGTGTGGCCGGGCGTGCTTTTCTCCTCCCTGGTCCAGATCGGGAT
CATCGTGGCCCTCTCCCTTGGCGTGTGGTTCATCCTGGCCGGGACGCTGGACGTGGCCGTGCTGGTGGCGCTGCTCATCG
TGGTCGTGCGTTTCAGCGAGCCTCTGGCACTGATCTACGGGCTCAGTCCGGTGTTCGACTACATGGAGGCAGGCTTCGAG
CAACTGGAAAAGCTGTTTTCCGTGAGACCCCTGCCCGTGCCTGAATCCGCCAAGACCCCGCAGCGGTTCGATGTGGCCTT
TGAGGGAGTCCGGTTCCGGTATGCCGACACCGACGTGGACGTGCTGCAAGAGGTGAGCTTCAGGCTGCCCGAACGCTCCC
TCACCGCACTGGTCGGGCCGTCGGGTTCCGGCAAGACCACCATCACCAAGCTGATCATGCGCTACGCCGACCCCCAGGCG
GGGCATGTCCGCATCGGCGGGGTGGACGTGCGGGACATGGAACCCAGGGCGCTGATGGGCTGCGTTTCCGTGGTGTTTCA
GGATGTCTACCTGTTTGACGACACCATCCACGCCAACATCCTCATGGGTCGGCCCGGAGCCACCGACGCCGAGGTGGAGA
CCGCGGCCAGGGCCGCGCACTGCCACGAATTTATCACCCGACTGCCCGACGGCTACCGGACACGGGTCGGCGATATCGGC
GGCTGCCTGTCCGGCGGCGAGCGTCAGCGCATCAGCATCGCACGGGCCATTCTCAAGGATGCCCCCATCGTCATGCTGGA
CGAGCCCACGGCCGCCCTGGACACCGAGAGCGAGGTAGCGGTGCAGCAGGCCATCGACACGCTGGTGCGGGACAAGACCG
TGGTTGTCATCGCGCATCGGCTTTCAACCATTGTCGGTGCCGACACCATCCTGGTCATTGATGATGGAAAGCTCGTCCAG
CAGGGCGGGCACGCCGAACTGCTGGCTCAGGCCGGACGGTATCGCAGCATGTGGGAGGCGCAGCAGGGCGTCAAGGACTG
GCACTTTGTCAAGGCGGCCAAGGCCCGATAG

Protein sequence : 
MTIRTDAVPPLAETWKRMQLASGDQVGALRTCMLFSILSAVAQGLGFACFYPLLGNLLATPSDWDTVCLWAGALAVCAVL
DTAFVWMSRRFDYTGCIAEVTHQLRIRLGEQLRRMPLENLYDRRTGELSAVLTGNVDEVVTPMGILSSAFLTILITPAVS
VAATALVDWRLALAMAAVFPLALPLYYWRRRSSGRSMRTLAAAHARTNSEMIEYVQGLPVLRATNQVGGRFERLRAALAH
LQEVQKEAQLRAVWPGVLFSSLVQIGIIVALSLGVWFILAGTLDVAVLVALLIVVVRFSEPLALIYGLSPVFDYMEAGFE
QLEKLFSVRPLPVPESAKTPQRFDVAFEGVRFRYADTDVDVLQEVSFRLPERSLTALVGPSGSGKTTITKLIMRYADPQA
GHVRIGGVDVRDMEPRALMGCVSVVFQDVYLFDDTIHANILMGRPGATDAEVETAARAAHCHEFITRLPDGYRTRVGDIG
GCLSGGERQRISIARAILKDAPIVMLDEPTAALDTESEVAVQQAIDTLVRDKTVVVIAHRLSTIVGADTILVIDDGKLVQ
QGGHAELLAQAGRYRSMWEAQQGVKDWHFVKAAKAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
irp7 YP_001006812.1 inner membrane ABC-transporter YbtQ Not tested HPI Protein 4e-125 47
irp7 YP_002346905.1 ABC transporter permease Not tested HPI Protein 1e-126 47
ybtQ NP_669703.1 permease and ATP-binding protein of yersiniabactin-iron ABC transporter Virulence HPI Protein 1e-126 47
ybtQ NP_993010.1 ABC transporter permease Virulence HPI Protein 1e-126 47
ybtQ YP_070127.1 ABC transporter permease Virulence HPI Protein 1e-126 47
ybtQ CAA21387.1 - Virulence HPI Protein 1e-126 47
irp7 CAB46572.1 inner membrane ABC-transporter, Irp7 Virulence HPI Protein 3e-125 47
APECO1_1055 YP_853072.1 ABC transporter Not tested PAI IV APEC-O1 Protein 1e-126 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Daes_0567 YP_004120332.1 ABC transporter-like protein BAC0433 Protein 5e-127 47