Gene Information

Name : Daes_0566 (Daes_0566)
Accession : YP_004120331.1
Strain : Desulfovibrio aespoeensis Aspo-2
Genome accession: NC_014844
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1132
EC number : -
Position : 603310 - 605127 bp
Length : 1818 bp
Strand : +
Note : KEGG: wsu:WS1264 ABC transporter ATP-binding protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase

DNA sequence :
ATGCGATCACAGGAAGATTGTTCGGGCTGCGGGCAGGAACATGTCGGTTCCGCCCGGCATCGGGAAGAACGGATTCCCGG
CATTTGGGAGCTGATGCGCCCGGTGCGGGCGGGCATCCGCACGGCCATAGCCATGTCGGCCATTGGCTCGGTGGCCGGGT
TGGCCGGAGTGGCCGCGCTGGCCCTGGTGGTCACGGCGTTGCTGGGTCACGATCCCCGGCTCTGGGTCTGGGTGTGCCTG
TCCATCGGGCTGACCCTGGTCAGCATCCTGCTGCGGGTGCAGGCATTCACCGTCTCCCACCTGGCGGCCTTCAAGCTGGA
GGTCAGGCTGCGTACCGGACTGACGGACCACCTGGCCCGGATTCCCCTGGGCTATCTTCTGGGGCAGGGGTCCGGGGTCA
TCACCAAGGTGGTGCAGGACGATGTCAAGAACCTGCACGCGTTCGTGGCGGACAGCACGCCGTTGTTGGGCCGGGGCGTG
GCTACGCCCGTGGTCACGCTGGCCCTGCTGCTGGCCATAGACTGGCGGCTGGCGCTGGTGGCGCTCGGCGTGCTGCTGGT
CGGCGCCCTGGCGGTGTGCCTGTGCATGCGCGGCAAGACCGAGCTGCAACGCCGCTATGACGCGGAGCGGGAACGGATCA
ACGGCACGGTGGTTGAGTTTGTCCAGGCCATGCCCGTGGTGCGGACCTTTGACGACGGCGCCGCCTCCTTTGGCCGCTAC
CAGGCCGCCCTGGACGGATTCAAGGCGACCATGTCCGAGTGGCTTCGGGTCTCCGGCACCAGCGGCAAGCTGGCCATCAC
GGTGCTTGCCCCTATGCCCACCCTGCTGGCCCTGACGCTGGGCGGGCTGATGCTCTACCACGGCGGTGATCTGGATTTCG
CCTCCTGGGCCGCAGTCCTCCTGCTTGGAACAGGCATGGCCGAATCCCTGGCCCCGCTCATGTGGCTCAACTTCTTCATC
CGCAAGGCCAACGCCAGCGCGCGCCGCATCCATGAGCTCATGGCCGTGCCCGAGCTGCCCGCCTCGGTCAGGGAGACCCT
GCCGCAGGACGCGTCCGTGACCTTTGAGAACGTCAGCTTTGCCTACGAAGGCCGGGATGACGACGCCCTGATCGACATCG
GCTTCACGGTGCCAACCGGGACCGTGACAGCCCTGGTCGGTCCGTCGGGCGCGGGCAAGAGCACGGTGGCGCGGCTGATC
CCTCGTTTCTGGGACGTGCGCCGGGGCGCGGTACGGATCGGCGGGGCAGACGTGCGCGACATGACCCCGCAGACCCTGAT
GGGCAACGTCTCCTTCGTCTTTCAGGACGCATTTCTTTTCCACGACACCATTGCCGCCAACATCCGCATGGGCCGTCCCG
ACGCCTCCATGGAGGAGGTGGAACAGGCCGCCCGCGCCGCCCAGGCGCACGACTTCATCAGCGAACTGCCCAACGGATAC
GAGGCCATGGCCGGGGAGCGCGGCACCCGGCTCTCGGGCGGACAGCGCCAGCGCATCACCATCGCCCGCGCCATCCTGCA
GGGTTGCCCTGTGGTGGTCCTGGACGAGGCCACGGCCTTTGCCGATCCGGAAAATGAGGCGGCGCTCATCGCGGCGCTGG
CCAACCTGATGAAGGGACGCACGGTGATCATCATCGCACACCGTCTCTCCACCATCCGCGACGCCGATCAGATCGTGGTT
CTGGACTATGGGCGGGTGGCGGAATCAGGCCGCCATGACGGCCTTGTGGCGGCGGGCGGTGTCTACGCCCGCCTTTGGGA
CAGTTACGAGCGGGCGCGCGGCTGGACATTGGGCCGCGGCGTCGATGCAGAAGCCTGA

Protein sequence :
MRSQEDCSGCGQEHVGSARHREERIPGIWELMRPVRAGIRTAIAMSAIGSVAGLAGVAALALVVTALLGHDPRLWVWVCL
SIGLTLVSILLRVQAFTVSHLAAFKLEVRLRTGLTDHLARIPLGYLLGQGSGVITKVVQDDVKNLHAFVADSTPLLGRGV
ATPVVTLALLLAIDWRLALVALGVLLVGALAVCLCMRGKTELQRRYDAERERINGTVVEFVQAMPVVRTFDDGAASFGRY
QAALDGFKATMSEWLRVSGTSGKLAITVLAPMPTLLALTLGGLMLYHGGDLDFASWAAVLLLGTGMAESLAPLMWLNFFI
RKANASARRIHELMAVPELPASVRETLPQDASVTFENVSFAYEGRDDDALIDIGFTVPTGTVTALVGPSGAGKSTVARLI
PRFWDVRRGAVRIGGADVRDMTPQTLMGNVSFVFQDAFLFHDTIAANIRMGRPDASMEEVEQAARAAQAHDFISELPNGY
EAMAGERGTRLSGGQRQRITIARAILQGCPVVVLDEATAFADPENEAALIAALANLMKGRTVIIIAHRLSTIRDADQIVV
LDYGRVAESGRHDGLVAAGGVYARLWDSYERARGWTLGRGVDAEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
irp6 YP_002346904.1 lipoprotein inner membrane ABC transporter Not tested HPI Protein 4e-105 54
ybtP CAA21388.1 - Virulence HPI Protein 4e-105 54
irp6 YP_001006813.1 lipoprotein inner membrane ABC-transporter Not tested HPI Protein 2e-105 54
ybtP YP_070126.1 lipoprotein inner membrane ABC-transporter Virulence HPI Protein 1e-104 53
ybtP YP_853073.1 inner membrane ABC-transporter Not tested PAI IV APEC-O1 Protein 6e-105 53
ybtP NP_669704.1 permease and ATP-binding protein of yersiniabactin-iron ABC transporter Virulence HPI Protein 4e-105 53
ybtP NP_993009.1 permease and ATP-binding protein of yersiniabactin-iron ABC transporter Virulence HPI Protein 4e-105 53
irp6 CAB46573.1 lipoprotein inner membrane ABC-transporter, Irp6 Virulence HPI Protein 8e-105 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Daes_0566 YP_004120331.1 ABC transporter-like protein BAC0432 Protein 2e-105 54