Gene Information

Name : Daes_0446 (Daes_0446)
Accession : YP_004120214.1
Strain : Desulfovibrio aespoeensis Aspo-2
Genome accession: NC_014844
Putative virulence/resistance : Unknown
Product : phage portal protein, PBSX family
Function : -
COG functional category : R : General function prediction only
COG ID : COG5518
EC number : -
Position : 487669 - 488649 bp
Length : 981 bp
Strand : -
Note : KEGG: dvl:Dvul_2768 PBSX family phage portal protein; TIGRFAM: phage portal protein, PBSX family; PFAM: portal protein

DNA sequence :
ATGAGCGAACCGCTGCTGTTTACCTTCGGCGATCCCGAGCCGGTTTTGAGCGGGATCATCTACGACTACCTCGGCACCTG
GCTGACGGACAACGGCACATACTATGCCCCGCCCGTGCCCTTCAAGGGGCTGGCCCGGCTGCTGCGGGCCAATGCCTACC
ACGGTCCGGCCATAGAGTTCAAAGTCAACCAGGTCATGCGCGGGTTCAAGGCGTCGCGCGCGGTGTCGCGCCGGACCATG
CACGCGGGCTGCACCGACTTCCATGTCTTCTACAACGCCTTCTTCCTCAAGGTGCGCAATCATTTCGGCGAGGTGGTCGG
CCTGCGCCAGCTGCCGAGCATCAACATGCGCCGGGCAAAAGCGACCGGCGTGTACTGCCTGCTGCTCGAGACCGGCAAGG
TCGTCACCTTCGAGCCCGACGAGGTCCTGCACGTCAAAAACTACGACGTGTGCCAGGAGATATACGGGCTGCCCGGATAC
CTCGGCGCGATCCAGTCCATGCTTCTCAATGAGGACGCGACGTTGTTCCGGCGCAAGTATTACAAGAACGGGGCGCACAT
GGGGTACATCTTCTATGCCGGGGGCCAGCTGGACCCCGAGACCCAGACCGCCATCAAGGAGCGAATCCAGGGGACCAAGG
GCATCGGCAACTTCCGCTCGATGTTCATCCACATACCAAACGGCAAGGAGAAGGAGATCCAGATCATCCCGGTGGGCGAC
TTCTCCACCAAGGACGAGCTGGAGAAGATCAAGAACCTGTCGCGCGATGACATCATCGCCGCGCACCGCATCCCCCCGGC
CATGGCCTGCCTCATCCCGCAGAACACCGGCGGCTTCGGCGACATCACCAAGATAGACGAGGTCTATCAGCGCAACGAGG
TCAAACCCGTGCAGGAGCTGCTGATGGAATCCATCAACGAGGTCTTGCTGCCCAGGGACTGGGTCACGTTTGACACTGGT
TCTGAAAGCTCCCCAATGTAG

Protein sequence :
MSEPLLFTFGDPEPVLSGIIYDYLGTWLTDNGTYYAPPVPFKGLARLLRANAYHGPAIEFKVNQVMRGFKASRAVSRRTM
HAGCTDFHVFYNAFFLKVRNHFGEVVGLRQLPSINMRRAKATGVYCLLLETGKVVTFEPDEVLHVKNYDVCQEIYGLPGY
LGAIQSMLLNEDATLFRRKYYKNGAHMGYIFYAGGQLDPETQTAIKERIQGTKGIGNFRSMFIHIPNGKEKEIQIIPVGD
FSTKDELEKIKNLSRDDIIAAHRIPPAMACLIPQNTGGFGDITKIDEVYQRNEVKPVQELLMESINEVLLPRDWVTFDTG
SESSPM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4628 NP_458710.1 probable capsid portal protein Not tested SPI-7 Protein 7e-50 43
t4321 NP_807917.1 capsid portal protein Not tested SPI-7 Protein 7e-50 43