|
Name : Daes_2992 (Daes_2992) Accession : YP_004122732.1 Strain : Desulfovibrio aespoeensis Aspo-2 Genome accession: NC_014844 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 3233803 - 3235080 bp Length : 1278 bp Strand : + Note : TIGRFAM: seryl-tRNA synthetase; KEGG: dsa:Desal_3376 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like DNA sequence : ATGCTTGATCTCAAATTGATGCAAAAGACCCCGGACCTGGTCCGGGAAAGCCTGAAAAAACGCGGCTCGAAAATCGACGT GCAGGAATTCCTGACCCTCGACGAACGCCGCAAGAGCCTCATCGCCGAAGGCGAAACCCTCAAGGCCGAGCGCAACGCCG CCGGGCCTGAAATCGCCAAATGCAAAAAATCCGGCCAGGACGCATCTGCCCTGCTCGCCCGGATGGCCGAAGTCTCCGAG CGGGTCAAGACCCTGGACGCCGAGCTGACCGAGGTCGAGACCGCCGAGCGCGACTGGCTCATGTCCGTGCCCAACATGCC GCACGAGTCCGTGCCCGTGGGCGCGAGCGAGGCGGACAACCCGGTGGTGCGCTCCTGGGGCGAGAAGCCGGTCATGGATT TCGAGCCCAAGGAACACTGGGAGCTTGGCACGGCCCTGGGCGGCCTGGATTTCGAGCGCGCGGCCAAGCTGGCCGGTTCG CGCTTTGCCTTGAGCTTTGGCTGGTGCGCCCGGCTGGAGCGCGCCCTGGCCCAGTTCATGCTCGACACCCAGACCACGCT GCACGGCTACACCGAGGTCATCCCGCCCTACATCGTCAACCGCAGGACCATGACCGGCACGGGCCAATTGCCCAAGTTCG AGGAGGACCTGTTCAAGCTTGAGGGCGTGGACTCTTTTCTCATCCCCACCGCCGAGGTGCCCCTGACCAACATCTATGCG GGCGAGGTCATCGACGAGGCAGCCCTGCCCGTCAAGTTCTGCGCGCATACGCCCTGTTTCCGTTCCGAGGCAGGCTCCTA CGGCAAGGACACCAAGGGGCTGATCCGGCTGCACCAGTTCCACAAGGTGGAGATGGTCAACTTCGCCCACCCGGACACAT CCTACGAGGCCCTGGAGGCCATGACCGCAGCAGCGGAAAAGATATTGCAGTTGCTCGGCATCCACTACCGGGTCATCGAG CTGTGTACCGGCGACATGGGCTTTGGCGCGACCAAGACCTACGACATCGAGGTCTGGCTGCCCGGCCAGAACCAGTACCG CGAGATATCCTCCTGCTCCAACTGCGGCGATTTCCAGGCCCGCCGGGCGGACATCCGGTTCCGCTCGCCCGGGTCCAAAA AGAATCAGTACGTGCACACCCTCAACGGTTCGGGCCTGGCTGTGGGCCGCTGTCTGGTGGCGGTCATGGAGAACGGCCAG CGGGCCGACGGCTCCATCGTCATCCCTGACGCGCTCAAGCCCTACATGGGTGGCCTTGAGGTGGTTGAGGCCAAGTAG Protein sequence : MLDLKLMQKTPDLVRESLKKRGSKIDVQEFLTLDERRKSLIAEGETLKAERNAAGPEIAKCKKSGQDASALLARMAEVSE RVKTLDAELTEVETAERDWLMSVPNMPHESVPVGASEADNPVVRSWGEKPVMDFEPKEHWELGTALGGLDFERAAKLAGS RFALSFGWCARLERALAQFMLDTQTTLHGYTEVIPPYIVNRRTMTGTGQLPKFEEDLFKLEGVDSFLIPTAEVPLTNIYA GEVIDEAALPVKFCAHTPCFRSEAGSYGKDTKGLIRLHQFHKVEMVNFAHPDTSYEALEAMTAAAEKILQLLGIHYRVIE LCTGDMGFGATKTYDIEVWLPGQNQYREISSCSNCGDFQARRADIRFRSPGSKKNQYVHTLNGSGLAVGRCLVAVMENGQ RADGSIVIPDALKPYMGGLEVVEAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-111 | 56 |
