Gene Information

Name : Daes_2552 (Daes_2552)
Accession : YP_004122298.1
Strain : Desulfovibrio aespoeensis Aspo-2
Genome accession: NC_014844
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 2756457 - 2757902 bp
Length : 1446 bp
Strand : -
Note : PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; manually curated; KEGG: tgr:Tgr7_2890 pyruvate kinase; TIGRFAM: pyruvate kinase

DNA sequence : 
ATGAAAAATACTCTTCGACGTACCAAAATCGTGGCAACCCTTGGACCGGCAACTTCTGATAGGGCAACCCTGCGCAATCT
GATCCAGGCTGGCGTCGATGTTGTCAGGCTCAATTTTTCTCATGGCACTGCGCAGGATCATATCCAAATGGCTGTTCGAG
TTCGTGAACTGGCGTCCGAGTTGAACCGAACCGTTGGCGTATTGGCCGACCTGCAGGGGCCAAAGATCAGGATTCGAGGA
TTTGAATCCGGTTCTGTCGTTTTAAAAGAAGGTCAATCATTCATCATTGATCCCTCTGTTGCCGTACAGAACGGCACTTC
GAATAGGGTCGGCATAACGTACCCATCGCTGGCCGAGGATGTATCATCTGGCACGATCCTTCTTCTTGATGACGGCAAAT
GCATCCTCGAAGTTGACGATATCCTCGGCAACCAAGTCCGTTGCATTGTAATCACAGGCGGCGTCCTATCCGGTGGCAAA
GGCGTCAACGTGCTGTCCGGCGGTCTTTCTGCCGGGGCGCTCACGGATAAGGACCGGGAGGACATGACGGCTGTGGCGAC
CATGCAGGCCGATTATCTTGCACTTTCCTTTGTTCGCAACGCAGCCGATGTAGACGAAGCCAGGGATATTCTCGCAGGGC
TTGGTTGGCACGGCTCAATTCTTGCCAAGATCGAAAGGGCCGAAGCACTGGAATACATCGAAACGATCATTATGGTTTCT
GACGGAATCATGGTGGCCCGCGGCGACCTTGGTGTGGAAATCGGCGATGCCAAATTGCCCGCCGTACAAAAGATGCTCAT
CAAGCGAGCCCGAAGCCTCAATCGCGTGGTTATCACCGCCACGCAGATGATGGACTCGATGATTACCAATCCTATACCCA
CACGGGCCGAGGTGTTCGATGTAGCCAATGCCGTCCTGGACGGCACTGACGGTGTCATGCTGTCGGCAGAGACGGCTGTT
GGTAAATATCCGGTAGAAGTGGTTGCGGCAATGGACGTCATCTGCCTTGAAGCGGAGAAACAGGAACAGGTAAGACATTC
GCGACACAGGGTGGACATGGAATTTACTCATGTTGACGAGACCGTCGCCATGTCGGCCATGTATGCGGCCAATCATACTG
AGACTGTGGCCATCGGAGCCTTCACCGAATCGGGCGGGACGCCGCTTTGGATGTCCAGGATCAGTTCAGGCATTCCAATT
TTTGCCCTGTCCCAAAATGAACAAACCCGTCGTAGGGTCTCGCTGTACCGGGGAGTGTATCCAATCAATTTCAACCCGGC
CTCGGTCTGCGCATCACAGCAGCATGAAGCTGCTGCGGCTGAACTGGTCAGGCTCGGCGTGGTCAAGCCCGGTGATCTCG
TGATTACAACAAGCGGTGACACTGCCGGAGAGCGTGGTGGAACAAACTCCATGCGCATCTGTAGAGTCGAAAAATACACA
CGGTAA

Protein sequence : 
MKNTLRRTKIVATLGPATSDRATLRNLIQAGVDVVRLNFSHGTAQDHIQMAVRVRELASELNRTVGVLADLQGPKIRIRG
FESGSVVLKEGQSFIIDPSVAVQNGTSNRVGITYPSLAEDVSSGTILLLDDGKCILEVDDILGNQVRCIVITGGVLSGGK
GVNVLSGGLSAGALTDKDREDMTAVATMQADYLALSFVRNAADVDEARDILAGLGWHGSILAKIERAEALEYIETIIMVS
DGIMVARGDLGVEIGDAKLPAVQKMLIKRARSLNRVVITATQMMDSMITNPIPTRAEVFDVANAVLDGTDGVMLSAETAV
GKYPVEVVAAMDVICLEAEKQEQVRHSRHRVDMEFTHVDETVAMSAMYAANHTETVAIGAFTESGGTPLWMSRISSGIPI
FALSQNEQTRRRVSLYRGVYPINFNPASVCASQQHEAAAAELVRLGVVKPGDLVITTSGDTAGERGGTNSMRICRVEKYT
R

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykA NP_273151.1 pyruvate kinase Not tested IHT-A Protein 1e-80 44
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 8e-62 41
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 3e-62 41
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 3e-62 41
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 7e-62 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Daes_2552 YP_004122298.1 pyruvate kinase VFG0479 Protein 1e-62 41