Gene Information

Name : Daes_2332 (Daes_2332)
Accession : YP_004122083.1
Strain : Desulfovibrio aespoeensis Aspo-2
Genome accession: NC_014844
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 2538131 - 2540728 bp
Length : 2598 bp
Strand : -
Note : TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; KEGG: dma:DMR_30670 chaperone ClpB; SMART: AAA ATPase

DNA sequence :
ATGGATTCCAACAAATTCACGCGCAAGACCCAGGAGGCCGTGTCCGAGGCCCAGAACCTCGCCATCCGCCACGGCCATCA
GCAGATAGACTGCGAGCACCTGATGCACGCCCTGGTGGCCCAGGAACAGGGGCTGGTGCCCCAGATACTGCGCAAGCTCG
GCGTGGCCCCGGACGCCTACATGGGCGCAGTGGACGCCGAGATCGCCAAGCTGCCCCGCGTCTCCGGCCCTGGCGCGCGG
CCCGACCAGATTCTGGTCACCCAGCGGCTCCAGTCCGTGCTGGTGGCCGCCGATGATCAGGCCCGGCGCATCAAGGATGA
GTTCGTCTCGGTGGAGCATGTCTTCCTGGCCCTGATGAACGAGCCGTCGTCCACGGGCGTGGGCCGGGTCAACAAGCAGT
TCGGCCTGGACGCCAACAAGGTGCTGAGGGCGCTGGGCGAGGTGCGCGGCAAGCAGCGCGTCACCTCGGACAACCCAGAG
GCCACCTACGACTCCCTCAAGAAATATGGCCGCGATCTGGTGGAGGAGGCCCGCCAGGGTCGGCTCGACCCTGTCATTGG
CCGGGGTAGCGAGATCCGGCGCGTCATCCGCATCCTCTCGCGCCGCACCAAGAACAACCCGGTGCTCATCGGCGAGGCGG
GCGTGGGCAAGACAGCCATCGCCGAGGGGCTGGCCCAGCGCATCGTGGCCCAGGACGTGCCCGAGGGGCTCAAGGAAAAG
ACCGTGTTCAGCCTGGACATGAGCGCGCTCATCGCCGGGGCCAAGTACCGCGGCGAGTTCGAGGAGCGGCTCAAGGCCGT
GCTCAAGGAGGTCCAGTCGTCCGCCGGGCAGATCATCATGTTCATCGACGAGCTGCACACCATCGTGGGCGCGGGCAAGA
CCGACGGGGCCATGGACGCGGGCAACATTCTCAAGCCCATGCTGGCGCGCGGCGAGCTGCACTGCATCGGCGCCACCACC
ATCGACGAGTACCGCAAGTACATCGAGAAGGATCCGGCCCTGGAGCGCCGTTTCCAGACCGTGCTGGTGGAGGAGCCGTC
GGTGGAGGACACCATCTCCATCCTGCGCGGCCTGCGCGAGCGGTTCGAGGTCCACCACGGCGTGCGCATCTCCGATGGCG
CGGTGGTCGAGGCCGCCGTGCTCTCCAACCGCTACATCACCGACCGCCAGTTGCCGGACAAGGCCATCGACCTCATCGAC
GAGGCCGCAGCCCTGATCCGCACCGAGATCGACTCCCAGCCCTACGAGCTGGACAAGGCCAACCGCCACATCATGCAGCT
TGAGATCGAGCGCGAGGCCCTCAAGCGCGAGACCGACAAGGCGTCGCACGAGCGGCTGGGCAAGCTGGAAAAGGACCTGG
CCGAGCTCAAGGAGCGCCAATCCGCCCTGCTGGCCCAGTGGGAGAACGAGAAGTCCGGCATCGAGCGGCTGCGCTCTCTC
AAGGGCGATATCGAATCCACCCGCCGGGGCATCGAGGAGGCCAAGCGCATCCATGACTACAACCGCGCCGCCGAGCTGGA
ATACGGCACCCTGGCCACCCTTGAGAAGGAGCTGGCCCAGCGCAACGAGGCGCTCGAATCCGGCGACATCCCGCGCATGG
TCAAGGAGGTGGTCGGCCCGGACGACGTGGCCCAGGTCATTGCCCGCTGGACCGGCATCCCGGTCTCCAGGCTTCTGGAG
GGCGAGCGCGAGAAGCTGCTTCGGCTGCCCGAGGTGCTGCACGGGCGCGTCATCGGCCAAGACGAGGCCGTGCAGGCCGT
GGCCGACGCTGTGCTGCGCGCCCGCGCCGGGCTCAAGGACCCGTCCCGGCCCATCGGCTCGTTCATCTTTCTCGGCCCCA
CGGGCGTGGGCAAGACCGAGCTGTGCAAGACCCTGGCCTCGGCCCTGTTCGACTCCGAGGACAACATGGTCCGCATCGAC
ATGTCCGAGTACATGGAAAAGCACACCGTGGCCCGGCTCATTGGCGCGCCTCCCGGCTACGTGGGCTACGACGAAGGCGG
CCAGCTGACCGAGGCCGTGCGCCGCAGGCCGTACTCTGTGGTCCTGTTCGACGAGATCGAGAAGGCGCACCACGACGTGT
TCAACGTCCTCCTGCAGATCCTCGACGATGGCCGCCTGACCGACTCCCATGGCCGCACCGTGGACTTCAAGAACACCATC
GTCATCATGACCTCGAACCTTGGGGCCGAGTACATGCTCGACGGCATCGACGAGCATGGGGAGTTCCGCGAGGGCGTGAC
CGGACAGGTCATGGAGGTGCTGCGCCGCCATTTCCGGCCCGAGTTCCTCAACCGCGTGGACGAGACCGTGCTCTTCAGGC
CGCTGCGTCTCGACCAGCTCATGGCCATCGTGGACCTGCTGGTGGACGGCCTTCGGGGGCGGCTGGCAGACCGCAAGATC
GGGCTGACCATGACCGACGCGGCCAGGGCGTTCATCGCCCAGTCCGCCTACGACCCGCACTTTGGCGCGCGGCCTCTGCA
CCGCTACATCCAGACCCATCTGGAAACGCCGCTGGCCAGGCGGATCATCTCCGGCGAGCTGGCCGACGGCGCCACCGTCA
CCCTGGACGAAGCCGGCGGGGAGCTGATTTTCAGCTAG

Protein sequence :
MDSNKFTRKTQEAVSEAQNLAIRHGHQQIDCEHLMHALVAQEQGLVPQILRKLGVAPDAYMGAVDAEIAKLPRVSGPGAR
PDQILVTQRLQSVLVAADDQARRIKDEFVSVEHVFLALMNEPSSTGVGRVNKQFGLDANKVLRALGEVRGKQRVTSDNPE
ATYDSLKKYGRDLVEEARQGRLDPVIGRGSEIRRVIRILSRRTKNNPVLIGEAGVGKTAIAEGLAQRIVAQDVPEGLKEK
TVFSLDMSALIAGAKYRGEFEERLKAVLKEVQSSAGQIIMFIDELHTIVGAGKTDGAMDAGNILKPMLARGELHCIGATT
IDEYRKYIEKDPALERRFQTVLVEEPSVEDTISILRGLRERFEVHHGVRISDGAVVEAAVLSNRYITDRQLPDKAIDLID
EAAALIRTEIDSQPYELDKANRHIMQLEIEREALKRETDKASHERLGKLEKDLAELKERQSALLAQWENEKSGIERLRSL
KGDIESTRRGIEEAKRIHDYNRAAELEYGTLATLEKELAQRNEALESGDIPRMVKEVVGPDDVAQVIARWTGIPVSRLLE
GEREKLLRLPEVLHGRVIGQDEAVQAVADAVLRARAGLKDPSRPIGSFIFLGPTGVGKTELCKTLASALFDSEDNMVRID
MSEYMEKHTVARLIGAPPGYVGYDEGGQLTEAVRRRPYSVVLFDEIEKAHHDVFNVLLQILDDGRLTDSHGRTVDFKNTI
VIMTSNLGAEYMLDGIDEHGEFREGVTGQVMEVLRRHFRPEFLNRVDETVLFRPLRLDQLMAIVDLLVDGLRGRLADRKI
GLTMTDAARAFIAQSAYDPHFGARPLHRYIQTHLETPLARRIISGELADGATVTLDEAGGELIFS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 5e-97 43
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 7e-97 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Daes_2332 YP_004122083.1 ATP-dependent chaperone ClpB VFG2076 Protein 1e-106 43