Gene Information

Name : Daes_1550 (Daes_1550)
Accession : YP_004121310.1
Strain : Desulfovibrio aespoeensis Aspo-2
Genome accession: NC_014844
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1729749 - 1730672 bp
Length : 924 bp
Strand : -
Note : KEGG: dsa:Desal_1953 tyrosine recombinase XerD; TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein

DNA sequence :
ATGGCCAGGGAACAGAAATCAGGCAGAGACACCCCCCCTGCCCACCATTGGGTGGACGGCTACCTTGAGCATGTCCTCAT
CGAAAAGGGACTCTCCGAAAACAGCCTGTCCGGCTATTCCGCCGACCTCGCCTCCCTGCTTGCCTTTCTTGAGGAAAAAT
CCTTCCGCCTTGAAGACCTGACCGAGCGCACGCTCTTTTTATATCTGACATATCTGCGCGCCAGGGGACTCCAGAGCCGC
TCCCTGGCCCGACACCTTTCGTCCCTGCGCGGCTTCTTCGCCTTTGCCCTGGACCAGCGCTGGTACAAGGAAGACCCCGG
CCATCTGCTGGAGAATCCCAAGCTGCCCAAAAAGCTCCCGGAATTCCTGACCCGCGAGGAAATGTCCCGTGTGCTCGCCC
TGCCCGAAACTGCCACAAAGCTGGGCATGCGCGATCAAGCCATGCTGGAGCTGCTCTACGCCGCCGGGCTGCGCGTCTCG
GAGCTGATCGAGATGAAGGTGCTGGACTACGACGCCCAGACCGGGCTGCTCCGGGTGTTCGGCAAGGGGGCCAAGGAACG
GCTGGTGCCCATCCACTATGTGGCGCAGGATGTGCTGAGTCGCTATCTGCTGAACACCCGTCCCGCCTTCCGCCCTGCCG
TGGACTTCATGTTCCTCAACCGCTCGGGCAAGGGGCTGACCCGTCAGGGGGTGTGGAAGCTGATCAAGACTTACGCGGAC
AAGGCCGGAATCAAACGGAGCATTTCGCCCCACACCTTTCGCCACTCCTTTGCCACCCATCTGCTCGAAGGCGGCGCGGA
CCTGCGCACCGTGCAGATGCTGCTCGGCCATTCCGACATCTCGGCAACGGAAATCTACACCCACATCCAGGCGGGCAGGC
TCAGGTCGATCCACCAGCAATACCACCCGCGGTCCTCCATGTGA

Protein sequence :
MAREQKSGRDTPPAHHWVDGYLEHVLIEKGLSENSLSGYSADLASLLAFLEEKSFRLEDLTERTLFLYLTYLRARGLQSR
SLARHLSSLRGFFAFALDQRWYKEDPGHLLENPKLPKKLPEFLTREEMSRVLALPETATKLGMRDQAMLELLYAAGLRVS
ELIEMKVLDYDAQTGLLRVFGKGAKERLVPIHYVAQDVLSRYLLNTRPAFRPAVDFMFLNRSGKGLTRQGVWKLIKTYAD
KAGIKRSISPHTFRHSFATHLLEGGADLRTVQMLLGHSDISATEIYTHIQAGRLRSIHQQYHPRSSM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 1e-39 46
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 1e-39 46