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Name : Pat9b_4120 (Pat9b_4120) Accession : YP_004119651.1 Strain : Genome accession: NC_014842 Putative virulence/resistance : Unknown Product : Integrase catalytic region Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 110112 - 110924 bp Length : 813 bp Strand : + Note : KEGG: sfv:SFV_0337 ISEhe3 orfB; manually curated; PFAM: Integrase catalytic region DNA sequence : GTGCTGGATGTTCATCCCAGTGGCTTTTACGCCTGGCTTCAGCAGCCGCATTCACAACGCCATCAGACAGACCTTAGACT GACAGGACAGATTAAACAGTTCTGGCTGGAGTCGGGATGCGTCTATGGTTATCGCAAGATCCATCTGGATCTGCGGGACA CCGGGCAACAGTGCGGAGTCAACAGAGTCTGGCGACTGATGAAACGTGCCGGGATAAAGGCTCAGGTCGGATACCGGAGC CCGCGGGCACGTAAAGGCGAGGCCTGTATCGTGTCGCCCAACAGGCTCCAGCGACAGTTCAATCCGGATGCTCCGGATGA GCGTTGGGTAACGGACACCACCTACATCAGGACCCACGAAGGCTGGCTGTATCTTGCCGTGGTTGTTGATCTGTTCTCAC GCAAAATTATCGGCTGGTCGATGCAATCCCGGATGACAAAGGACATTGTCCTGAACGCATTGCTGATGGCTGTATGGCGG CGTAATCCCCAAAAACAGGTGCTGGTTCACTCTGATCAGGGCAGTCAGTACACAAGCCATGAGTGGCAGTCGTTCCTGAA ATCACACGGCCTGGAGGGGAGCATGAGCCGTCGCGGTAACTGCCACGATAATGCGGTTGCAGAAAGCTTTTTCCAGTTGC TGAAGCGTGAACGGATAAAGAAAAAGATCTATGGAACGCGGGAAGAAGCCCGCAGCGATATTTTTGATTACATCGAAATG TTTTATAACAGTAAGCGCTGGCATGGTTCGAGTGATCAGATGCCACCGACGGAATATGAAAATCAATATTATCGACGGCT CAGAAGTGTCTAG Protein sequence : MLDVHPSGFYAWLQQPHSQRHQTDLRLTGQIKQFWLESGCVYGYRKIHLDLRDTGQQCGVNRVWRLMKRAGIKAQVGYRS PRARKGEACIVSPNRLQRQFNPDAPDERWVTDTTYIRTHEGWLYLAVVVDLFSRKIIGWSMQSRMTKDIVLNALLMAVWR RNPQKQVLVHSDQGSQYTSHEWQSFLKSHGLEGSMSRRGNCHDNAVAESFFQLLKRERIKKKIYGTREEARSDIFDYIEM FYNSKRWHGSSDQMPPTEYENQYYRRLRSV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpB | CAB61574.1 | transposase B | Not tested | HPI | Protein | 3e-42 | 44 |
| unnamed | AAL57581.1 | transposase 1 | Not tested | LEE | Protein | 6e-39 | 44 |
| unnamed | AAL57519.1 | transposase 1 | Not tested | LEE | Protein | 3e-39 | 44 |
| trp1329B | CAB46576.1 | IS1329 transposase B | Not tested | HPI | Protein | 2e-41 | 43 |
| ECO111_3732 | YP_003236068.1 | putative IS3 transposase InsF | Not tested | LEE | Protein | 4e-38 | 43 |
| l7094 | CAD33743.1 | ORF B protein | Not tested | PAI I 536 | Protein | 4e-28 | 41 |
| orfB | CAE85178.1 | OrfB protein, IS911 | Not tested | PAI V 536 | Protein | 4e-28 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Pat9b_4120 | YP_004119651.1 | Integrase catalytic region | VFG1484 | Protein | 2e-28 | 41 |
