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Name : Pat9b_4009 (Pat9b_4009) Accession : YP_004119549.1 Strain : Genome accession: NC_014842 Putative virulence/resistance : Unknown Product : Integrase catalytic region Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 12700 - 13494 bp Length : 795 bp Strand : - Note : PFAM: Integrase catalytic region; KEGG: ddc:Dd586_2844 transposase IS3/IS911 family protein DNA sequence : ATGAGCTTACGTCAGGCATGCAGGACATTGTCGCTGAGCAGGACGGTATTTCGTTACCAGCCGGATACGCAACGTGATGA ACCGGTGATTATGGCGCTGACCGTGGCGGCTGAACGCTATCCACGATACGGATTTAAAAAGCTTTTTCAGGTACTTCGCA GGCAGGGCAACGCCTGGAACCATAAAAGAGTTCACCGGATTTACTGCCTGCTGAAACTGAATTTTCGCCGTAAGGGAAAA CAGCGCCTGCCGGTGCGTAATCCGGCTCCGCTGGTAACGCCGGAGGCGATGAACCAGAGTTGGTCCATCGATTTTATGCA CGATGCGCTGGTGTGCGGCAGACGCTTCCGGACCTTCAACGTGGTGGATGATTTTAACCGGGAAGCGCTGGCGATCGAAA TTGACCTGAATATCCCGGCGCAGCGGGTTGTGAGAGTACTGGACAGGATCGTGGCAAACCGTGGATATCCGCTGAAGATG CGGATGGATAACGGTCCTGAGCTGATCTCGCTGACGCTGGCACAGTGGGCAGAAGAGCATGGTGTGATGCTGGAATTTAT CAGGCCCGGCAAGCCAACGCAGAATGCCTTTATCGAACGGTTCAACCGGACATACAGAACAGAAATACTGGATTTTTATC TGTTCAGAACACTGAATGAAGCACGGGAAATGACAGAGCACTGGCTGGCTGAATATAACAGCGAGCGCCCCCACGAATCC CTGAATAACCTGACGCCGGAAGAGTACCGGCTGATGGCTGAAAAGCCGGAAATCTCAAAAGATGCGTGGAACTAA Protein sequence : MSLRQACRTLSLSRTVFRYQPDTQRDEPVIMALTVAAERYPRYGFKKLFQVLRRQGNAWNHKRVHRIYCLLKLNFRRKGK QRLPVRNPAPLVTPEAMNQSWSIDFMHDALVCGRRFRTFNVVDDFNREALAIEIDLNIPAQRVVRVLDRIVANRGYPLKM RMDNGPELISLTLAQWAEEHGVMLEFIRPGKPTQNAFIERFNRTYRTEILDFYLFRTLNEAREMTEHWLAEYNSERPHES LNNLTPEEYRLMAEKPEISKDAWN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| trp1400B | CAB46580.1 | IS1400 transposase B | Not tested | HPI | Protein | 3e-115 | 92 |
| unnamed | ABR13352.1 | insertion sequence IS407 OrfB | Not tested | PAGI-5 | Protein | 2e-34 | 44 |
| unnamed | ABR13540.1 | insertion sequence IS407 OrfB | Not tested | PAGI-8 | Protein | 4e-43 | 43 |
