Gene Information

Name : Pat9b_4200 (Pat9b_4200)
Accession : YP_004119320.1
Strain :
Genome accession: NC_014841
Putative virulence/resistance : Virulence
Product : PfkB domain-containing protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0524
EC number : -
Position : 73173 - 74144 bp
Length : 972 bp
Strand : +
Note : PFAM: PfkB domain protein; KEGG: pwa:Pecwa_3718 ribokinase

DNA sequence :
ATGAAAGGTAAAGTGTGCGTATTCGGTTCCTTCAACCTCGACATCGTCACCAAAATGTCGCGCTTTCCACAGCCTGGCGA
GTCACTGGTGGCGCACAGCAGCATGATGGGGCCGGGCGGCAAAGGTTCGAATCAGGCCACGGCAGCATTGCGCGCCGGTG
CCAGGGTGCATTACATCGGCAAAGTGGGCAATGACGACTTCGGCCTGTTTGCCCGTCGCCATCTGGAGAAGACCGGTTTT
GACGCGATCACGCTGTTTACCTGCAAAGAAAAACCAACCGGTAACGCCATGATCTACGTGGCCGGTGATGATGCTGAAAA
CATGATCTCGGTTTACCCCGGTGCCAACCTGATGGTCACCGCCGCAGAGGTGAACCGTTGCCAGCCCACCGTCGCGGCCG
CCGACATTTTGCTGGTGCAACTCGAAAACAACCTGAGCGCCATTCAACGCATGGTGGATAACGCCCGCCAGGCGGGAACC
TATGTGATTGTGAACCCGGCGCCGTGGCAAAAAGTGAGCGATGCCTTTCTGCGTCATGTTGACCTGCTTACACCGAATAG
TACGGAAGCCGGTCAACTGACCAACACCAATGTCACCGATCTGGCTTCCGCGCAGGTGGCGGCGCAGATTCTGCACGGCA
AAGGGGTGCGCCAGTTGATCATCACCCTCGGCATTCAGGGCGCACTACTCTCGACCGGTGAACGTATGTTGCTGGTGCCG
GTTTTCCCGGCGCAGCCAGTGGACAGTACCGGAGCGGGCGATTCCTTTAACGGCGCACTGGCGGCACGTCTGGCGGCGGG
TGAACCGCTGGAGCAGGCGGCGCTGTTCGCTTCGGCGTATGCCTCGGTATGCGTCGAACGTGCCGGGGCAGCGAACTCCA
TGCCGCGCTACGACGACGCCGTAAAACGCATGCAGCAGTTCCCGGAACTGGCGATCAGCGAGATCGGTGTGTCTGCTGCC
GCCACGCCGTAG

Protein sequence :
MKGKVCVFGSFNLDIVTKMSRFPQPGESLVAHSSMMGPGGKGSNQATAALRAGARVHYIGKVGNDDFGLFARRHLEKTGF
DAITLFTCKEKPTGNAMIYVAGDDAENMISVYPGANLMVTAAEVNRCQPTVAAADILLVQLENNLSAIQRMVDNARQAGT
YVIVNPAPWQKVSDAFLRHVDLLTPNSTEAGQLTNTNVTDLASAQVAAQILHGKGVRQLIITLGIQGALLSTGERMLLVP
VFPAQPVDSTGAGDSFNGALAARLAAGEPLEQAALFASAYASVCVERAGAANSMPRYDDAVKRMQQFPELAISEIGVSAA
ATP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rbsk YP_216390.1 DeoR family transcriptional regulator Not tested SPI-2 Protein 3e-48 44
orf408 NP_460347.1 regulatory protein Not tested SPI-2 Protein 9e-48 43
ORF 408 CAB37417.1 - Not tested SPI-2 Protein 7e-48 43
APECO1_1076 YP_853096.1 carbohydrate kinase Not tested PAI IV APEC-O1 Protein 8e-52 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pat9b_4200 YP_004119320.1 PfkB domain-containing protein VFG0483 Protein 4e-48 43