Gene Information

Name : Pat9b_4274 (Pat9b_4274)
Accession : YP_004119394.1
Strain :
Genome accession: NC_014841
Putative virulence/resistance : Virulence
Product : Aldehyde Dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 153669 - 155141 bp
Length : 1473 bp
Strand : +
Note : PFAM: Aldehyde Dehydrogenase; KEGG: bfa:Bfae_31630 NAD-dependent aldehyde dehydrogenase

DNA sequence :
ATGACTTCCTTACCTGAGACCGTTCGTACCCAGGCATTGATCAATGGACAGTTTGTTGCTGCTGAACATGGCGCAGTGTT
TGATAACTACAACCCGGCCACCGGCCAGGTGCTGAACCAGATTGCCGCCTGTTCTGAAGGTGATGTGGATAAAGCGGTGC
AGGCCGCGCGTGAGGCTTTTCAGGCCGGGGTCTGGAGCCGTCTCGATCCGCGTGAGCGCAAACGTATTTTGCTGAAGTTC
GCCAGCCTGCTGGAGCAGCATACGGCGGAACTGGCTCAGCTGGACTCCATTGATGCCGGTAAGCCGATCTCGGACTGTGA
GAACTTCGATATCCCGGATGTGGTGAATAACGTGCGCTGGTATGCCGAGGCCATCGATAAGGTGTTTGGCAAAATTTCAC
CAACAGGGGAAGGTAACCTCGGGTTGATTGTGCGCGAGCCGGTCGGGGTGGTCGGTATGGTGCTGCCGTGGAATTTCCCG
GCGGCTACCCTTTCGTGGAAGATCTCCCCGGCGCTGGCGGCAGGTAACTCGATTGTGGTGAAACCGGCCGAGCTGGCGTC
GCTGTCAACCCTGCGTATTGGCGAACTGGCGCTGGAAGCGGGAATTCCGGCCGGGGTGTTTAACGTGGTGCCGGGACTGG
GGCATATTGCAGGCAAAGCACTGGGTTTACACCAGGATGTGGATGCATTGACCTTTACCGGCTCCACCGAAATTGGCCGT
CAGTTCCTGCGTTACTCCGCCGACAGCAACCTGAAGAAAGTGGTGCTGGAGTGTGGCGGTAAAAGTCCGCAAATCATCAT
GCCGGATGTGTCGGAGAATCTCGACAGCATCGCCGAAAACCTGGCAAACGCTGCCTTCTGGAATATGGGGCAGAACTGCA
CCTGCGGCTCGCGCATTCTGGTGCATGAATCCATTAAAGACGCCTTTATGGTGGCGTTTACCAAAGCGGCGGCCATCTGG
AAAAACGGCCAGCCGGGCGATCGCGCCACCAAACTCGGACCGATGATTGAACCCTCAGCATTGAAACGGGTGCTGGGTGC
CATCGATCAGGCGGTCAGCGAAGGCGGCAAACTGGCGCTGGGTGGCAAACAGGTACTGACCGAGACCGGCGGCTGGTTCG
TTGAGGCGACGATTATCGATCAGGTCACCGCAGAGATGACGCTGGCGCAGCAGGAAATCTTTGGCCCGGTGGTGGCGATC
ATGACCTTTGGATCTGAAGAAGAAGCGGTGACGTTGGCGAACAACTCAGAATATGGCCTGGCGGCGACGGTGTTTGCGAA
TGACATCAACGTGGCTATCCGCATGGCGCGTCAGATTCAGGCAGGCACCGTGGCGGTGAATGGCTATGGCGAAGGGGATA
TCACCACACCCTTCGGCGGCTATAAAACCTCGGGTTTTGGCGGCTACGACAAAGGTATCGAAGCCTTTGATCAATACACC
CATGTGAAAACCGTCTGGGTTTCGCTGAGCTGA

Protein sequence :
MTSLPETVRTQALINGQFVAAEHGAVFDNYNPATGQVLNQIAACSEGDVDKAVQAAREAFQAGVWSRLDPRERKRILLKF
ASLLEQHTAELAQLDSIDAGKPISDCENFDIPDVVNNVRWYAEAIDKVFGKISPTGEGNLGLIVREPVGVVGMVLPWNFP
AATLSWKISPALAAGNSIVVKPAELASLSTLRIGELALEAGIPAGVFNVVPGLGHIAGKALGLHQDVDALTFTGSTEIGR
QFLRYSADSNLKKVVLECGGKSPQIIMPDVSENLDSIAENLANAAFWNMGQNCTCGSRILVHESIKDAFMVAFTKAAAIW
KNGQPGDRATKLGPMIEPSALKRVLGAIDQAVSEGGKLALGGKQVLTETGGWFVEATIIDQVTAEMTLAQQEIFGPVVAI
MTFGSEEEAVTLANNSEYGLAATVFANDINVAIRMARQIQAGTVAVNGYGEGDITTPFGGYKTSGFGGYDKGIEAFDQYT
HVKTVWVSLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 1e-99 48
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-64 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 7e-65 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 7e-65 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 7e-65 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-64 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pat9b_4274 YP_004119394.1 Aldehyde Dehydrogenase VFG0082 Protein 2e-64 41