Gene Information

Name : Pat9b_4767 (Pat9b_4767)
Accession : YP_004118656.1
Strain :
Genome accession: NC_014839
Putative virulence/resistance : Virulence
Product : salicylate synthase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0147
EC number : -
Position : 56272 - 57597 bp
Length : 1326 bp
Strand : -
Note : KEGG: yen:YE2612 salicylate synthase Irp9; TIGRFAM: salicylate synthase; PFAM: Chorismate binding-like

DNA sequence :
ATGACGGATACACGCACCGAGCTTCGGCTCAACTTGCCCGCAGATCAGACGCTGGCCGCGATCGTCAGCCTTATCCGGCA
GAATCCGACCGAGGATTACTACGTTTATGAACGGCCACCCTGCTGGTATGTCGGTCTGGGTAAACGCGCAAGTTTAGCCC
TTTCACCCGATGGCACCCAGGCAACAACCGAAAGCGAAGCGGGCTGCCAGACGGTACCGGTTACCTCGTCTCTGGCGCAT
TACGCCCGCCAGTTCAGTGCGCAACATGCCAGCGCAGGACAACGTGTTTTTGGCATGGCCGGATTTAACTACGCGGCCAG
CATTCGCGGGCTACCTTTCCCGGCCGGTGAGTGGCCACTACTGTCGTTGCTGGTGCCGCGTGATGAACTGGTTTTTGACG
CAGGGGAAGTCAGGATCCTGGCGCAGACTGCAGACCAATGCCAGCGGCTCGCCCAGCAATTACAGGACACCTCCCCGGCA
CCGGTTGGCGCTACGTTGCTGGCCGACCTGACCGCTCAGGGGAAAGATTATCAGCAGCGGGTGACACACGCGCTTGAAGA
GATCGCCGCAGGTGAATACACCAAGGTGATTGTGTCCCGTGCTCTGGCGCTGTCACAACGTATCGACATGCCCGCGACTC
TCTGGCGCGGAAGAATGGCCAATACCCCGGCACGTAGTTTCTTACTGCAACAGGGGGCGTTTGCCGCCACTGGCTTCAGC
CCAGAGATGGTTGTGACGGTTGAGCAGGGCATCGTTACCAGTGAACCGCTGGCGGGTACCCGTGCGCTATCCGGTTCTGC
GGGTGAAGATGCTTACAATCGGGCTGAGCTGCAAAGCGATAGCAAAGAGATAGTGGAACACGTTATCTCGGTTAAAGCAG
CCATCGAGGAGCTGGAAACGCTGTGCCTAAATGATTCGGTGGCGGTCACCAATCTGATGTCGGTCCGTGAAAGGGGCAGC
GTGCAACATCTGGGTTCGCAGGTGCGGGGTGAACTGGCGTCAGGGCGCGATGCCTGGGATGCTTTTGATGTGCTGTTCCC
GGCGATCACGGCCTCGGGTATTCCCAAGATCCCGGCATTGGCCGCCATCCTCAAACTGGAAGCGGTGCCGCGTGAACTTT
ACTCCGGTGCGATATTGATGCTCGAAGGTGATCAATCGTTTGAGGCAGCATTGGTCCTGCGCAGTGCATTTCAGGATGCG
CACAGAAGCTGGATCCAGGCCGGAGCCGGGGTGATTGCCCAGTCGAATGCGTTACGTGAACTGACGGAGACCTGTGAGAA
GCTTTCCAGTGTGGCTCCTTACTTGGTGGTTGAGCAAGTGAAATGA

Protein sequence :
MTDTRTELRLNLPADQTLAAIVSLIRQNPTEDYYVYERPPCWYVGLGKRASLALSPDGTQATTESEAGCQTVPVTSSLAH
YARQFSAQHASAGQRVFGMAGFNYAASIRGLPFPAGEWPLLSLLVPRDELVFDAGEVRILAQTADQCQRLAQQLQDTSPA
PVGATLLADLTAQGKDYQQRVTHALEEIAAGEYTKVIVSRALALSQRIDMPATLWRGRMANTPARSFLLQQGAFAATGFS
PEMVVTVEQGIVTSEPLAGTRALSGSAGEDAYNRAELQSDSKEIVEHVISVKAAIEELETLCLNDSVAVTNLMSVRERGS
VQHLGSQVRGELASGRDAWDAFDVLFPAITASGIPKIPALAAILKLEAVPRELYSGAILMLEGDQSFEAALVLRSAFQDA
HRSWIQAGAGVIAQSNALRELTETCEKLSSVAPYLVVEQVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
irp9 YP_001006810.1 salicylate synthase Irp9 Not tested HPI Protein 2e-114 57
irp9 CAB46570.1 salicylate synthetase, Irp9 Virulence HPI Protein 4e-115 57
APECO1_1052 YP_853070.1 salicylate synthase Irp9 Not tested PAI IV APEC-O1 Protein 2e-113 57
ybtS YP_002346907.1 salicylate synthase Irp9 Not tested HPI Protein 2e-113 57
ybtS NP_669701.1 salicylate synthase Irp9 Not tested HPI Protein 2e-113 57
ybtS YP_070129.1 salicylate synthase Irp9 Not tested HPI Protein 2e-113 57
ybtS CAA21385.1 - Virulence HPI Protein 2e-113 57
ybtS NP_993012.1 salicylate synthase Irp9 Not tested HPI Protein 5e-113 56
unnamed AAD17661.1 unknown Not tested HPI Protein 2e-103 54