Gene Information

Name : Pat9b_4987 (Pat9b_4987)
Accession : YP_004118839.1
Strain :
Genome accession: NC_014839
Putative virulence/resistance : Unknown
Product : polysaccharide export protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1596
EC number : -
Position : 262484 - 263623 bp
Length : 1140 bp
Strand : +
Note : PFAM: polysaccharide export protein; Soluble ligand binding domain; KEGG: kpn:KPN_02512 CPS export - outer membrane protein

DNA sequence : 
ATGATGATGAAATTGCCTTTCAGATTATCCGCTATTGCGGTATCTGTTTTTTTTCTTTCTGCCTGCACCATCGTTCCCGG
CCAACATTTATCAACGAGTGATAAAGATGTGGTAGAGCAGATGGATTCGAATACGGACATTAGCAAATACGTTACTGTTT
ATCCGCTAACACCAAAATTGCTTGATTCGCTGCAACCACAAAAAGTAATGTCCAGCGCCAACCCACAGCTGGAAGATGAA
ATCAAAAATTACCAGTACCGTATCGGCATTGGTGATGTCTTGATGGTGACGGTATGGGATCACCCTGAACTGACTACACC
AGCCGGGCAATACCGCAGTGCCAGCGATACTGGTAACTGGGTGAACACCGATGGCACCATCTTTTATCCTTATATTGGCA
AGGTACATGTTGCAGGTCGCACGATCGATGAAGTCCGTAACGAAATCACCGAACGTCTGAGAACCTATATTGAAAGCCCA
CAAGTTGATGTCAGCATCGCCGCGTTCCGATCGCAAAAAGCCTATGTGACCGGGGAAGTGGTGCGATCGGGCCAGCAGGC
CATCAGCAATATCCCCCTAACGGTGATGGACGCGATCAATGCTGCAGGTGGTTTAGCCCCGGATGCGGACTGGCGCAATG
TGGTGCTGACTCACAATGGAAAAGACAGCCTGATTTCTTTACAAGCCTTAATGCAGCAAGGCGATCTCCGTGAAAACCGT
TTGCTGACACCTGGGGACATTTTGTTTGTACCGCGTAATGACGACCTGAAAGTATTCGTGATGGGCGAAGTTAATAAACA
GTCCACGCTCAAGATGGACCGCAGCGGTATGACGTTAGCTGAAGCGCTCGGTAATGCCGAAGGTGTTTCACAGGAATTGG
CGGATGCATCGGGGATCTTTGTGATCCGTCAACTACATAACCCGGCAGGGAAGGGGAAGCTAGCCAATATTTACCAGCTA
AATGCGAAAGATGCTGCGGCGATGGTGATGAGTACTTCTTTCCAGTTGCAGCCGTATGACATCGTCTATGTCACTGCCGC
ACCAATTGTGCGTTGGAACCGTGTTATTTCGCAATTGGTTCCGACGATTGGCGGCGTGCATGACCTTGTCCAATCTGGAC
AGTACATCCGCGAGTGGTGA

Protein sequence : 
MMMKLPFRLSAIAVSVFFLSACTIVPGQHLSTSDKDVVEQMDSNTDISKYVTVYPLTPKLLDSLQPQKVMSSANPQLEDE
IKNYQYRIGIGDVLMVTVWDHPELTTPAGQYRSASDTGNWVNTDGTIFYPYIGKVHVAGRTIDEVRNEITERLRTYIESP
QVDVSIAAFRSQKAYVTGEVVRSGQQAISNIPLTVMDAINAAGGLAPDADWRNVVLTHNGKDSLISLQALMQQGDLRENR
LLTPGDILFVPRNDDLKVFVMGEVNKQSTLKMDRSGMTLAEALGNAEGVSQELADASGIFVIRQLHNPAGKGKLANIYQL
NAKDAAAMVMSTSFQLQPYDIVYVTAAPIVRWNRVISQLVPTIGGVHDLVQSGQYIREW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf39 AAO18064.1 Orf39 Not tested TTSS locus Protein 3e-128 66