Gene Information

Name : Pat9b_4945 (Pat9b_4945)
Accession : YP_004118801.1
Strain :
Genome accession: NC_014839
Putative virulence/resistance : Virulence
Product : transport system permease protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 215357 - 216322 bp
Length : 966 bp
Strand : -
Note : PFAM: transport system permease protein; KEGG: cko:CKO_03836 iron-dicitrate transporter permease subunit

DNA sequence : 
ATGACCCGCTGGATCATCAGTCTGGCGCTGTTGCTCATCGCCTTCTGGTTTAGCCTGATCAGCTTCTCACCGGTGCCGAT
TGCGCCGCAGTCGGCACTGCATGCGTTGTGCCCGGGACAACCGAGCAACATCGGTGAGGCGTTGATGTTTAATCTGCGGT
TGCCGCGCGCCCTGGTGGCGGTGTTGCTCGGAGCGGCACTGGCGCTGGCGGGAGGATTGTTGCAGGCGCTGACCCATAAT
CCGCTGGCGTCGCCTGGGGTACTGGGGATTAACAGTGGCGCGGCGTTGGCGATTGCGTTGGTGTCAGCTTTTGCTCCACT
AAAGCTGGCAGGCTACCCGCTGGCGCTGATTGCTGCCGGCGGTGGGGCGCTCAGTTGGTTGTGCGTCACGTTGGCCGCCG
GGACGCGCGAGCGGCAGCGGTTGATCCTCGCCGGTATCGCGCTTTCTGCTTTCTGCATGGCGATGACACGGATTGTGCTG
TTGCTGGCGGAAGACCACGCTTACGGCATCCTCACCTGGCTGGCCGGGGGCATCGCCCATGCGCGCTGGCAGGAGGTATG
GCAGCTGTTACCGGTGGTGCTGGTGATTGCCCCGCTGGTCTTAACACAAACTCGTGCGCTCAATTTGCTGAGCATGGGCG
ATGATGCGGCGCACAGCCTCGGCGTCAATATTTTCGCCGTGCGCATCGGGCTGAGTAGCGCGTTGCTGTTATTGGTGGGA
GCTTGCGTCAGCGTAGCGGGGCCGTTGGGGTTTATTGGCCTGTTGGTGCCGCATCTGGCGCGAGCCTGGATCGGACACGA
TCTGCGTTTCATGCTGCCGATGGCGATGCTGATGGGGGCGACGTTATTACTGACGGCAGATATTGCGGCACGCGGGCTGG
CATGGCCCGGTGAGTTGCCCGCTGGCGTAGTGTTGGCGCTGGTCGGTGCGCCCGGTTTTCTCTGGCTGGCAAGGAGGCAA
CCATGA

Protein sequence : 
MTRWIISLALLLIAFWFSLISFSPVPIAPQSALHALCPGQPSNIGEALMFNLRLPRALVAVLLGAALALAGGLLQALTHN
PLASPGVLGINSGAALAIALVSAFAPLKLAGYPLALIAAGGGALSWLCVTLAAGTRERQRLILAGIALSAFCMAMTRIVL
LLAEDHAYGILTWLAGGIAHARWQEVWQLLPVVLVIAPLVLTQTRALNLLSMGDDAAHSLGVNIFAVRIGLSSALLLLVG
ACVSVAGPLGFIGLLVPHLARAWIGHDLRFMLPMAMLMGATLLLTADIAARGLAWPGELPAGVVLALVGAPGFLWLARRQ
P

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecC AAL08453.1 FecC Virulence SRL Protein 4e-43 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pat9b_4945 YP_004118801.1 transport system permease protein VFG1044 Protein 3e-43 62