Gene Information

Name : Pat9b_5770 (Pat9b_5770)
Accession : YP_004118482.1
Strain :
Genome accession: NC_014838
Putative virulence/resistance : Unknown
Product : glycoside hydrolase family 31
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1501
EC number : -
Position : 645075 - 647108 bp
Length : 2034 bp
Strand : +
Note : PFAM: glycoside hydrolase family 31; KEGG: stm:STM0041 putative glycosyl hydrolase

DNA sequence :
ATGAGCGAATTACGCGCCGAATCCCAGCGTATCGTCTGGACCTTTGACCGTCAGACCCTGGTTATCGAACCCTGGGGGGC
GAACAGCCTGCGGGTGCGCGCCACCTGCCAGACGGCACTGATTGACAGCGATTGGGCGCTGTTACCGCCAACGCCTTGTG
AAGTCGATATCCAACGTGAGCCTGAACTGCTGCGCATACGCAACGGCAACATCACCGCGACGCTGAATATGCGTGGACAA
CTGGCCTTCTACAACCAACACGGTGAATTGTTGCTTGAGGAGTTCTGGCGGCAACGCAGCACAGTCGGTATTGGTGCCAC
AGAAAAGAGCCAGGATAAGTACATCAGCGCGCTGAAACTGGATGCCCGCACCTTTCGCCCGATTCCCGGCGGGAAATATC
AGCTCAGCGTGCGTTTTGAAGCGCGACGCGAAGAGAAAATTTATGGCATGGGGCAATACCAGCAGGATTGCCTCGATTTG
AAAGGCTGTACGCTGGAACTGGCGCAGCGAAATTCGCAAGCCAGCGTGCCGTTTATGGTGTCCAGTCTCGGTTACGGTCT
GCTGTGGCACAACCCGGCAATCGGTGAAGTGACCTTCGGTAAGAACGGCACGCGCTGGCAGGCCGAGGTCACCGACCAGA
TGGATTACTGGATCACTGCGGGCGACACCCCGGCGGAGATCGTGCGCCAGTATGGCCGCGCCACCGGCACTGCGCCGATG
ATGCCTGCCTTCGCCACCGGTTTTTGGCAATGCAAACTGCGCTATCGTACCCAGCAGGAGGTGCTGGAAGTGGCACGCGA
GTATCGCCGTCGGCAATTGCCTCTCTCGGTGATTGTCATCGACTTTTTCCACTGGCCGAATCAGGGAACCTGGTGCTTTG
ATGCCCGTGACTGGCCCGATCCCAAAGCCATGGTCGAGGAACTGAAAGCGATGGGGATTGAAACCATGGTCTCGGTCTGG
CCGACCGTGGATAGCCGCAGCGATAACTATCGGCTGATGAAATCCAAAGGGTTGCTGGTCAACAGCGAGCGCGGCGTCTC
GGTCAATCTGGACTTTATGGGCAACACCACCTTCTTTGATGCCACCCATCCTGCGGCACGCGAGTTTGTCTGGCAGGAGG
TGAAGCGCAATTATTATGACCACGGCATTCGCACCTTCTGGCTGGATGAAGCCGAGCCGGAGTATCGCGCCTACGATTTT
GATAACTACCGCTATCATCTTGGCCCGGTGCAGGAAGTGGGTAACATTTATCCACAACTGTTTGCCCGTGGCTTTTATGA
AGGGCTGCAACAACAGGGCGAAAGCGACATCGTCAATCTGGTGCGATGCGCCTGGGCGGGCAGCCAGCGTTACGGCGTGC
TGGCCTGGTCGGGCGATGTGCACTCCTCCTTCCACGCGCTGCGCAACCAGTTCACCGCCGGGCTGAATATGGCGATGGCC
GGGATTCCGTGGTGGACCACCGATATCGGTGGTTTCCAGGGTGGCAACATCCATGATCCGGCGTTTCATGAATTGCTGAT
CCGCTGGTTCCAGTGGGCGGTGTTCTGCCCGGTGATGCGATTACATGGCTACCGGGAACCGCAGATTGAGCCGACAGAAG
CCTGGCGCGATGGTATTGCGCAATGCAATAGCGGCTCGCCCAATGAAGTGTGGAGCTATGGCGAGGAGAATTTTGCCTTG
ATGAAAAGTTGCCTGCTGCAACGTGAACGGCTGCGTCCCTACATTGACGGGCTGATGCGCGAGGCACATGAGCTGGGCGA
TCCGGTGATGCGACCGCTGTTTTATCACTACCCCGAGCAAACTGAAAGCTGGCAGGTGGAAGATCAGTATCTGCTGGGGC
GCGACCTGTTGGTCGCCCCGGTACTGCACGCCGGTCAGCGTGAACGGGAGGTGTGGTTACCGGCGGGTGATCAGTGGCTG
GCACGTAATGGCGAGTGCTACCAGGGCGGACAACGCCTCGTTGTCGCGGCCCCGCTGAGTGCCATTCCGGTGTTCAGCCG
TGTCGGCGGCAGTGCCGAGGTGCTCGACAGTTAA

Protein sequence :
MSELRAESQRIVWTFDRQTLVIEPWGANSLRVRATCQTALIDSDWALLPPTPCEVDIQREPELLRIRNGNITATLNMRGQ
LAFYNQHGELLLEEFWRQRSTVGIGATEKSQDKYISALKLDARTFRPIPGGKYQLSVRFEARREEKIYGMGQYQQDCLDL
KGCTLELAQRNSQASVPFMVSSLGYGLLWHNPAIGEVTFGKNGTRWQAEVTDQMDYWITAGDTPAEIVRQYGRATGTAPM
MPAFATGFWQCKLRYRTQQEVLEVAREYRRRQLPLSVIVIDFFHWPNQGTWCFDARDWPDPKAMVEELKAMGIETMVSVW
PTVDSRSDNYRLMKSKGLLVNSERGVSVNLDFMGNTTFFDATHPAAREFVWQEVKRNYYDHGIRTFWLDEAEPEYRAYDF
DNYRYHLGPVQEVGNIYPQLFARGFYEGLQQQGESDIVNLVRCAWAGSQRYGVLAWSGDVHSSFHALRNQFTAGLNMAMA
GIPWWTTDIGGFQGGNIHDPAFHELLIRWFQWAVFCPVMRLHGYREPQIEPTEAWRDGIAQCNSGSPNEVWSYGEENFAL
MKSCLLQRERLRPYIDGLMREAHELGDPVMRPLFYHYPEQTESWQVEDQYLLGRDLLVAPVLHAGQREREVWLPAGDQWL
ARNGECYQGGQRLVVAAPLSAIPVFSRVGGSAEVLDS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0551 NP_814321.1 glycosyl hydrolase Not tested Not named Protein 8e-154 45
ef0077 AAM75281.1 EF0077 Not tested Not named Protein 6e-154 45