Gene Information

Name : Pat9b_0910 (Pat9b_0910)
Accession : YP_004114790.1
Strain : Pantoea sp. At-9b
Genome accession: NC_014837
Putative virulence/resistance : Unknown
Product : S-adenosylmethionine/tRNA-ribosyltransferase- isomerase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0809
EC number : -
Position : 1043900 - 1045051 bp
Length : 1152 bp
Strand : +
Note : KEGG: ddc:Dd586_1002 S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; TIGRFAM: S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein

DNA sequence :
ATGAAGCACAGCCAGTTGTTCAGAATTGGTCGCTTTTCCGCTAAACTATGCCGCCTGTTTTTAGTCCTGAAGAAGTTGAG
CATGCGTGTAGCGGATTTTTCCTTTGAATTGCCGGAATCTTTGATCGCCCATTACCCCCAGGCGCAGCGCAGCGGTTGCC
GTCTGTTATCGCTGGATGGCCCAAGCGGGGCGTTGAGTCATGGCGTCTTTACCGATGTGTTGGAGAAGCTCAATCCGGGC
GATCTGCTGGTATTCAATAACACCCGCGTGATCCCGGCGCGCGTTTATGGCCGTAAAGCCAGTGGCGGCAAAATCGAGAT
GCTGGTGGAGCGCATGCTGGACGACAAACGTGTGCTGGCGCATGTTCGTGCCTCAAAAGCCCCAAAACCGGGAGCAGAAT
TGCTGCTGGGCGATGACGAAAGCGTTAAAGCGACCATGGTGGCGCGCCACGATACATTGTTTGAAATTGCCTTCGAAGAT
GACCGTGCCGTGTTGGATATCCTCAACAGCGTCGGCCACATGCCGTTGCCGCCGTACATCGATCGCCCGGATGAAGAAGC
TGACCGCGAGTTGTACCAGACGGTGTACAGCGCCCGCCCCGGGGCCGTCGCTGCGCCGACCGCCGGTTTGCACTTTGATG
ACCCGCTGTTGCAGGCGCTGAAGGCGAAAGGCGTGGAGATGGCGTTTGTCACGCTGCACGTGGGAGCCGGGACTTTCCAG
CCGGTGCGCGTGGAGAGTATTGAAGATCACACCATGCACTCCGAATATGCCGAAGTACCGCAAGAGGTGGTGGATGCGGT
GCTGGCCTGCAAAGCGCGGGGCAACAAAGTGGTGGCGGTAGGCACCACCTCAGTTCGCTCGCTGGAGAGTGCTGCACAGG
CGAGTAAAGATGCGCTGATTGCGCCTTTCTTCGATGATACCCAGATTTTTATTTACCCCGGCTATCAGTATCAGGTGATC
GATGCGTTGATCACCAATTTCCACTTGCCGGAATCCACCCTGATTATGCTGGTGTCGGCGTTTGCCGGTTATCAGCACAC
CATGGCGGCTTATCAGGCGGCGGTGGCCGAGCAGTACCGTTTCTTTAGCTACGGGGATGCCATGTTCATTACCCGTAATG
TGAATGCACCCGACGAGAGCGTTGGGTCTTAA

Protein sequence :
MKHSQLFRIGRFSAKLCRLFLVLKKLSMRVADFSFELPESLIAHYPQAQRSGCRLLSLDGPSGALSHGVFTDVLEKLNPG
DLLVFNNTRVIPARVYGRKASGGKIEMLVERMLDDKRVLAHVRASKAPKPGAELLLGDDESVKATMVARHDTLFEIAFED
DRAVLDILNSVGHMPLPPYIDRPDEEADRELYQTVYSARPGAVAAPTAGLHFDDPLLQALKAKGVEMAFVTLHVGAGTFQ
PVRVESIEDHTMHSEYAEVPQEVVDAVLACKARGNKVVAVGTTSVRSLESAAQASKDALIAPFFDDTQIFIYPGYQYQVI
DALITNFHLPESTLIMLVSAFAGYQHTMAAYQAAVAEQYRFFSYGDAMFITRNVNAPDESVGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
queA AAF71483.1 QueA Not tested Hrp PAI Protein 2e-120 71
queA AAT96106.1 QueA Not tested T-PAI Protein 2e-115 71
queA AAT96070.1 QueA Not tested T-PAI Protein 1e-115 71
queA AAT96042.1 QueA Not tested T-PAI Protein 1e-115 71
queA AAT96122.1 QueA Not tested T-PAI Protein 2e-120 71
queA AAF71490.1 QueA Not tested Hrp PAI Protein 3e-114 71
queA AAT96182.1 QueA Not tested T-PAI Protein 1e-113 70